RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TACSTD2P09758 323 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 F3P13726 295 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ADRB3P13945 408 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 NAGAP17050 411 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 NT5EP21589 574 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ATP5A1P25705 553 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GIFP27352 417 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CD82P27701 267 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 AGTR1P30556 359 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CCKBRP32239 447 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 NUP62P37198 522 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CLCNKAP51800 687 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 AGFG1P52594 562 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 PSMD4P55036 377 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 DLX5P56178 289 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 RPS15AP62244 130 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SNRPD2P62316 118 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CSNK1G2P78368 415 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 PUDPQ08623 228 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 FGL1Q08830 312 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 FUT5Q11128 374 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 STX4Q12846 297 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SGCGQ13326 291 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 FGFBP1Q14512 234 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CDK5R1Q15078 307 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TGIF1Q15583 401 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ACSM3Q53FZ2 586 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 NHLRC3Q5JS37 347 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MFSD12Q6NUT3 480 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LPCAT3Q6P1A2 487 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CLEC18BQ6UXF7 455 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GLDNQ6ZMI3 551 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 C3P1Q6ZMU1 363 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 WDR88Q6ZMY6 472 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ASB18Q6ZVZ8 466 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LINGO2Q7L985 606 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 BCDIN3DQ7Z5W3 292 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 C11orf96Q7Z7L8 435 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GRAMD2AQ8IUY3 354 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF547Q8IVP9 402 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SIAH3Q8IW03 269 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CDH26Q8IXH8 852 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SLC35F3Q8IY50 421 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF619Q8N2I2 560 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 UBE2J2Q8N2K1 259 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR2L13Q8N349 312 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LRRC25Q8N386 305 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SIRT6Q8N6T7 355 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MFSD9Q8NBP5 474 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CAMKVQ8NCB2 501 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CLEC18CQ8NCF0 446 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF740Q8NDX6 193 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR10H4Q8NGA5 316 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR4F15Q8NGB8 312 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR6C4Q8NGE1 309 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR5D16Q8NGK9 328 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR2T35Q8NGX2 323 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR2T4Q8NH00 348 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF671Q8TAW3 534 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 NT5CQ8TCD5 201 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CPT1CQ8TCG5 803 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SMAP2Q8WU79 429 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CCDC107Q8WV48 283 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM239Q8WW34 195 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SLC22A18Q96BI1 424 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MS4A6EQ96DS6 147 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GIMAP5Q96F15 307 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 S100A16Q96FQ6 103 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MRGPRX4Q96LA9 322 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 OR2A7Q96R45 310 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TEAD3Q99594 435 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GPA33Q99795 319 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ARPC5LQ9BPX5 153 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TRIM2Q9C040 744 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 B3GNT4Q9C0J1 378 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 RERGLQ9H628 205 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM27Q9HBJ8 222 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MRPS30Q9NP92 439 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LHX9Q9NQ69 397 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SLC17A5Q9NRA2 495 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM140Q9NV12 185 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 FBXO34Q9NWN3 711 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 TEX10Q9NXF1 929 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 SLCO1C1Q9NYB5 712 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 RDH8Q9NYR8 311 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF224Q9NZL3 707 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 CNIH4Q9P003 139 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 UPB1Q9UBR1 384 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 RPS6KB2Q9UBS0 482 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 MALT1Q9UDY8 824 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 PISDQ9UG56 409 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 APOBEC3BQ9UH17 382 aaKnown RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF107Q9UII5 783 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF223Q9UK11 482 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-203ENST00000554264 GPR52Q9Y2T5 361 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 WDR45Q9Y484 360 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 LOXL2Q9Y4K0 774 aa5.35□□□□□ -1.55
VPS33B-203ENST00000554264 UBR5O95071 2799 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms