RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 OR4K1Q8NGD4 311 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RPLP0P6Q8NHW5 317 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NDNFQ8TB73 568 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SFT2D1Q8WV19 159 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 KIAA1143Q96AT1 154 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SIPA1Q96FS4 1042 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TEAD3Q99594 435 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 APOL4Q9BPW4 351 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TMEM109Q9BVC6 243 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TPPP3Q9BW30 176 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ERVK-6Q9BXR3 956 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NMUR2Q9GZQ4 415 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 DNTTIP1Q9H147 329 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 NOL11Q9H8H0 719 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MED20Q9H944 212 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PNO1Q9NRX1 252 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 SLC7A10Q9NS82 523 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TREX1Q9NSU2 369 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TEX10Q9NXF1 929 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 MYEF2Q9P2K5 600 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 IL17BQ9UHF5 180 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 ELF5Q9UKW6 265 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 RNF150Q9ULK6 438 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CSAG2Q9Y5P2 127 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 HELZP42694 1942 aaKnown RBP3.89□□□□□ -1.79
ATXN3-225ENST00000554214 PTPRBP23467 1997 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 TRIP11Q15643 1979 aa3.89□□□□□ -1.79
ATXN3-225ENST00000554214 CACNA1EQ15878 2313 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 A0A1B0GW55 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TRBC2A0A5B9 178 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 C9orf170A2RU37 121 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 PP2D1A8MPX8 630 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 HACD1B0YJ81 288 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 EPM2AB3EWF7 344 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TRDCB7Z8K6 153 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TMEM238C9JI98 176 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 F8VP50 259 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 M0QYV0 167 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 RGS16O15492 202 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 POP7O75817 140 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 PSMD10O75832 226 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 KRT33AO76009 404 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 B3GAT3O94766 335 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 SUPT7LO94864 414 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 GLCEO94923 617 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 AKR7A3O95154 331 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 GSRP00390 522 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 GOT2P00505 430 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 IFNA7P01567 189 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 UGT2B4P06133 528 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CHRNGP07510 517 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 APRTP07741 180 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 NUDT17P0C025 328 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 RAB40ALP0C0E4 278 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L2P0CJ85 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L3P0CJ86 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L4P0CJ87 422 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L5P0CJ88 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L6P0CJ89 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 DUX4L7P0CJ90 424 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 OR8G3PP0DMU2 310 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CALCBP10092 127 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 IFI30P13284 250 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 F3P13726 295 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CD1EP15812 388 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 LBPP18428 481 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 C4BPBP20851 252 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 MSR1P21757 451 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 HNRNPA2B1P22626 353 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 OTX1P32242 354 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 PTGER4P35408 488 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CEACAM6P40199 344 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 MAP3K8P41279 467 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 RPS5P46782 204 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 METAP1P53582 386 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 XGP55808 180 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CXCR4P61073 352 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 VLDLRP98155 873 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 SPIBQ01892 262 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TNFRSF17Q02223 184 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 RGS1Q08116 209 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 FGL1Q08830 312 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 SLAQ13239 276 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TNK1Q13470 666 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 GRK1Q15835 563 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 FAM189A2Q15884 450 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 EXT1Q16394 746 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 SLC5A12Q1EHB4 618 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 OR2B11Q5JQS5 317 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 ACER2Q5QJU3 275 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 ATAD3CQ5T2N8 411 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 TMIGD1Q6UXZ0 262 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 SCARA5Q6ZMJ2 495 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 VTCN1Q7Z7D3 282 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 MRPL52Q86TS9 123 aaKnown RBP3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CYP4Z1Q86W10 505 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 CATSPER3Q86XQ3 398 aa3.88□□□□□ -1.79
ATXN3-225ENST00000554214 ZBTB8OSQ8IWT0 167 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms