RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ULBP2Q9BZM5 246 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 SAP30LQ9HAJ7 183 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 C12orf10Q9HB07 376 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 MMP26Q9NRE1 261 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 PLEK2Q9NYT0 353 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 PDP1Q9P0J1 537 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-219ENST00000553488 P2RX2Q9UBL9 471 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 PURGQ9UJV8 347 aaKnown RBP6.14□□□□□ -1.43
ATXN3-219ENST00000553488 NUP50Q9UKX7 468 aa6.14□□□□□ -1.43
ATXN3-219ENST00000553488 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 NOTCH3Q9UM47 2321 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TRAV36DV7A0A075B6V5 113 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 A0A087WUJ7 227 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SLC22A23A1A5C7 686 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 A8MXK9 166 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TRAPPC2LH3BP13 241 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TM9SF1O15321 606 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ITM2AO43736 263 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 OR2T1O43869 369 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 MFN2O95140 757 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SNAP29O95721 258 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 IGHV1-46P01743 117 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 IGHMP01871 453 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 BGLAPP02818 100 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 BCHEP06276 602 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 BPGMP07738 259 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ALDOCP09972 364 aaKnown RBP6.13□□□□□ -1.43
ATXN3-219ENST00000553488 CCL2P13500 99 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF12P17014 697 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 S100A3P33764 101 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ETV4P43268 484 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 RAD52P43351 418 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ATP4BP51164 291 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 MMP15P51511 669 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 CRISP3P54108 245 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 GLO1Q04760 184 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 RBBP4Q09028 425 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF154Q13106 437 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 BAMBIQ13145 260 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TM4SF20Q53R12 229 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 CD276Q5ZPR3 534 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 WDR88Q6ZMY6 472 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 C9orf139Q6ZV77 190 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF771Q7L3S4 317 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-219ENST00000553488 THNSL2Q86YJ6 484 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 IFT20Q8IY31 132 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TRIML2Q8N7C3 387 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF781Q8N8C0 355 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SCAIQ8N9R8 606 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 MNS1Q8NEH6 495 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SLC30A7Q8NEW0 376 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 OR6S1Q8NH40 331 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF519Q8TB69 540 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SYNPRQ8TBG9 265 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TCP10LQ8TDR4 215 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SLC38A5Q8WUX1 472 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 RAB1CQ92928 201 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SLC25A28Q96A46 364 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TRIM44Q96DX7 344 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-219ENST00000553488 ELMOD3Q96FG2 381 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TIMD4Q96H15 378 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM19Q96HH6 336 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 C16orf45Q96MC5 204 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-219ENST00000553488 MOGAT1Q96PD6 335 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 PANX1Q96RD7 426 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 GPA33Q99795 319 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 PKP2Q99959 881 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 CITED1Q99966 193 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 OR51B6Q9H340 312 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 B3GAT2Q9NPZ5 323 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 DCAF16Q9NXF7 216 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 SLCO1C1Q9NYB5 712 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 CALML5Q9NZT1 146 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 POFUT2Q9Y2G5 429 aa6.13□□□□□ -1.43
ATXN3-219ENST00000553488 A0A1B0GWA3 101 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 ZSCAN5BA6NJL1 495 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 F5H0A9 414 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 SPAG7O75391 227 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 FOXH1O75593 365 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 IGHV3-13P01766 116 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 IGHV2-70P01814 119 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 ADH4P08319 380 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 OR8G3PP0DMU2 310 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 IGHV4-38-2P0DP08 117 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 ETFAP13804 333 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 NAT1P18440 290 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 CBLP22681 906 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 LSP1P33241 339 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 CSNK1A1P48729 337 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 DSTNP60981 165 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 SEC61A1P61619 476 aaKnown RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 UFM1P61960 85 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 PUDPQ08623 228 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 PMS2P3Q13401 168 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 CAMK2DQ13557 499 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 LARS2Q15031 903 aaKnown RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 TSTQ16762 297 aaKnown RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 HFEQ30201 348 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 GTDC1Q4AE62 458 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms