RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 ARHGEF17Q96PE2 2063 aaPredicted RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 ZFYVE9O95405 1425 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CPDO75976 1380 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 MROH7Q68CQ1 1323 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 PRR23AA6NEV1 266 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 OR2AT4A6NND4 320 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 HACD1B0YJ81 288 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 J3QLI3 93 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 EEDO75530 441 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 LYPD3O95274 346 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 RAB36O95755 333 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 HLA-AP01891 365 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 C2P06681 752 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 NHLRC4P0CG21 123 aaPredicted RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 ITGA2P17301 1181 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 ZFP36L2P47974 494 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 IDH3GP51553 393 aaPredicted RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 HILS1P60008 231 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 RHOAP61586 193 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 RPS14P62263 151 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 RPL31P62899 125 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 ELAVL2Q12926 359 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 ARL6IP1Q15041 203 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 UNC50Q53HI1 259 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 SPIN3Q5JUX0 258 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 LRRN1Q6UXK5 716 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 FRRS1Q6ZNA5 592 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 S100A7AQ86SG5 101 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 MRPL52Q86TS9 123 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 MTURNQ8N3F0 131 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 PGBD5Q8N414 524 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 BPIFB2Q8N4F0 458 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 PRELID2Q8N945 189 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 OR1K1Q8NGR3 316 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 ZNF502Q8TBZ5 544 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 SFXN5Q8TD22 340 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 OR5P2Q8WZ92 322 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 CREB3L1Q96BA8 519 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 MOCOSQ96EN8 888 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 CGREF1Q99674 301 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 OVOL2Q9BRP0 275 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 ULBP1Q9BZM6 244 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 MFSD1Q9H3U5 465 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 THUMPD1Q9NXG2 353 aaKnown RBP5.3□□□□□ -1.56
VPS29-210ENST00000552130 LGALS13Q9UHV8 139 aa5.3□□□□□ -1.56
VPS29-210ENST00000552130 CNTNAP1P78357 1384 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 ZMYM2Q9UBW7 1377 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PLEKHH1Q9ULM0 1364 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 KIR2DS1A0A191URI9 304 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 hCG_38984A0A1B0GV85 526 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 F5H768 121 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 K7ERI5 159 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 CDC7O00311 574 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 SLC1A7O00341 560 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 CCRL2O00421 344 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PRKYO43930 277 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 MPZL2O60487 215 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 RAMP1O60894 148 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 DUSP11O75319 330 aaKnown RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 ATP6V1G2O95670 118 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 OXTP01178 125 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 LGALS2P05162 132 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 HOXB7P09629 217 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 IL12AP29459 219 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 C21orf33P30042 268 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 PLA2G5P39877 138 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PRKXP51817 358 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PSME3P61289 254 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 RPS13P62277 151 aaKnown RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 ZNF85Q03923 595 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 SRSF6Q13247 344 aaKnown RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 DYNC1I2Q13409 638 aaKnown RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 GGTLC2Q14390 218 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 KIR2DS1Q14954 304 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 EMC2Q15006 297 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 ABRAXAS2Q15018 415 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 TAF1AQ15573 450 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 CD226Q15762 336 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PSMD5Q16401 504 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 TMEM176BQ3YBM2 270 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 CHRFAM7AQ494W8 412 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 MEDAGQ5VYS4 303 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 OR52E8Q6IFG1 317 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 FRMPD2BQ6IN97 320 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 GFRALQ6UXV0 394 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 ADAMTSL5Q6ZMM2 481 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 PRSS48Q7RTY5 328 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 VKORC1L1Q8N0U8 176 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 DUSP18Q8NEJ0 188 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 SEMA6DQ8NFY4 1073 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 OR5L1Q8NGL2 311 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 OR2AE1Q8NHA4 323 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 DNASE2BQ8WZ79 361 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 FBXO17Q96EF6 278 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 DNAJA3Q96EY1 480 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 HSFY1Q96LI6 401 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 C17orf77Q96MU5 243 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms