RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 STXBP1P61764 594 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 HERVK_113P63132 956 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 ERVK-8P63133 956 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 PHEXP78562 749 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 RPL36AP83881 106 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 H3F3AP84243 136 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TNFRSF17Q02223 184 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 CHIT1Q13231 466 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 SLAMF1Q13291 335 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 BIKQ13323 160 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 GANABQ14697 944 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 OPCMLQ14982 345 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 P2RY6Q15077 328 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TRIP13Q15645 432 aaPredicted RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 LTB4RQ15722 352 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TAB1Q15750 504 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TMEM249Q2WGJ8 235 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TTLL9Q3SXZ7 439 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 GLYR1Q49A26 553 aaPredicted RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 WDR38Q5JTN6 314 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 OR4C11Q6IEV9 310 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 SULT1C3Q6IMI6 304 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 FAM166AQ6J272 317 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 SLC48A1Q6P1K1 146 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 BTNL8Q6UX41 500 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TFAP2EQ6VUC0 442 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 NUFIP2Q7Z417 695 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 PIGWQ7Z7B1 504 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 LUZP2Q86TE4 346 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 MEX3DQ86XN8 651 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 OR2L13Q8N349 312 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 METTL4Q8N3J2 472 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 STPG4Q8N801 248 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 WDR31Q8NA23 367 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF383Q8NA42 475 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TTLQ8NG68 377 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 OR7G2Q8NG99 324 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 OR7G1Q8NGA0 311 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 OR4C3Q8NH37 302 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 SLC22A8Q8TCC7 542 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 MGARPQ8TDB4 240 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 ACTRT1Q8TDG2 376 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 C10orf105Q8TEF2 133 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 CERS2Q96G23 380 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 VPS39Q96JC1 886 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 C1orf147Q96MC9 270 aaPredicted RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF75AQ96N20 296 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TNFRSF13CQ96RJ3 184 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 AIF1LQ9BQI0 150 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 DOHHQ9BU89 302 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 NTMT1Q9BV86 223 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 C19orf24Q9BVV8 132 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 TSSK1BQ9BXA7 367 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 ERVK-6Q9BXR3 956 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 PLA2G12AQ9BZM1 189 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 RHOJQ9H4E5 214 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 RPF2Q9H7B2 306 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 COQ10BQ9H8M1 238 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 CAB39LQ9H9S4 337 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 POPDC3Q9HBV1 291 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 FARSBQ9NSD9 589 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 ZFP57Q9NU63 452 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 C20orf96Q9NUD7 363 aaPredicted RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 UTP6Q9NYH9 597 aaKnown RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 ARMCX1Q9P291 453 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 BOKQ9UMX3 212 aaPredicted RBP2□□□□□ -2.09
CPSF6-207ENST00000551516 ERVK-19Q9WJR5 959 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 PLLPQ9Y342 182 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF175Q9Y473 711 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 CLCA3PQ9Y6N3 262 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 DSCAMO60469 2012 aa2□□□□□ -2.09
CPSF6-207ENST00000551516 IGHV4-61A0A0C4DH41 118 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 C2orf92A0A1B0GVN3 265 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF716A6NP11 495 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RNF212BA8MTL3 300 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SMIM1B2RUZ4 78 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PRSS46E5RG02 174 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 H7C417 338 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 UPK1AO00322 258 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 P2RY10O00398 339 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SAP18O00422 153 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 UBFD1O14562 309 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 KLF11O14901 512 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ACOX3O15254 700 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ARHGEF9O43307 516 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 KERAO60938 352 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GLRA3O75311 464 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 BCAS1O75363 584 aaPredicted RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 VENTXO95231 258 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TTC4O95801 387 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PNPP00491 289 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TSHBP01222 138 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 IGHV4-59P01825 116 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RPS17P08708 135 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TACSTD2P09758 323 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 CPMP14384 443 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 STMN1P16949 149 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF17P17021 662 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 NT5EP21589 574 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms