RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 F2RL3Q96RI0 385 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC25A21Q9BQT8 299 aaPredicted RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC35A5Q9BS91 424 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 FBXO44Q9H4M3 255 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TMEM231Q9H6L2 316 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 DBNDD1Q9H9R9 158 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 BRF2Q9HAW0 419 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PLEKHA2Q9HB19 425 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 BCL2L10Q9HD36 194 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 PARD6AQ9NPB6 346 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NRIP3Q9NQ35 241 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 HINT3Q9NQE9 182 aaKnown RBP4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SAGE1Q9NXZ1 904 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 CLDND1Q9NY35 253 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TAS2R10Q9NYW0 307 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 TAS2R8Q9NYW2 309 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 IL17CQ9P0M4 197 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 OR5V1Q9UGF6 321 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC27A6Q9Y2P4 619 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 WIF1Q9Y5W5 379 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 WDR90Q96KV7 1748 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 SCN1AP35498 2009 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 NUP205Q92621 2012 aa4.79□□□□□ -1.64
LSM3P2-201ENST00000551246 LCTP09848 1927 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 RLFQ13129 1914 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 A0A087WUU8 490 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ZC3H12DA2A288 527 aaKnown RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 CDRT15L2A8MXV6 281 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 F5H0A9 414 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 H0YIZ8 118 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SOCS6O14544 535 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC16A5O15375 505 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 GPR39O43194 453 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 OR1F1O43749 312 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 HBP1O60381 514 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 CIDEAO60543 219 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 B4GALT2O60909 372 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 NME6O75414 186 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 GJB3O75712 270 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ARL6IP5O75915 188 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 DDNO94850 711 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SLCO2B1O94956 709 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 NXPH2O95156 264 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 GUCA1CO95843 209 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 PPBPP02775 128 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 BCHEP06276 602 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 C8GP07360 202 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 GJB1P08034 283 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 CSF1P09603 554 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 OR5AC1P0C628 307 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 EPCAMP16422 314 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC2A5P22732 501 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 G0S2P27469 103 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ITPKBP27987 946 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 PCSK1P29120 753 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 HOXA11P31270 313 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 TIA1P31483 386 aaKnown RBP eCLIP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 MC4RP32245 332 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 THBS4P35443 961 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 FAUP35544 74 aaKnown RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 AHRP35869 848 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ACVRL1P37023 503 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 NSG1P42857 185 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 PNLIPRP1P54315 467 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ATP1B3P54709 279 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 CLDN12P56749 244 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 YBEYP58557 167 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 TAS2R38P59533 333 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 RPS15P62841 145 aaKnown RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 DLK1P80370 383 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 FOXF1Q12946 379 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 CDK5R1Q15078 307 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SHHQ15465 462 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 TGIF1Q15583 401 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNHIT3Q15649 155 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 RPE65Q16518 533 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 MOGAT2Q3SYC2 334 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 EMC4Q5J8M3 183 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ZNF772Q68DY9 489 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ADAM5Q6NVV9 412 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ULK3Q6PHR2 472 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ARL9Q6T311 187 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SMIM5Q71RC9 77 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SSX6Q7RTT6 188 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 P4HA3Q7Z4N8 544 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SCN4BQ8IWT1 228 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 SYS1Q8N2H4 156 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 GALNT16Q8N428 558 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 FAM24BQ8N5W8 94 aa4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 ARL14EPQ8N8R7 260 aaPredicted RBP4.78□□□□□ -1.64
LSM3P2-201ENST00000551246 BOLLQ8N9W6 283 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms