RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 SEMG1P04279 462 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 TP53P04637 393 aaPredicted RBP11.53□□□□□ -0.56
CEP290-205ENST00000550962 HEXAP06865 529 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 SLC25A16P16260 332 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 SDHAP31040 664 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 RRM2P31350 389 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 THBS4P35443 961 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 MSX2P35548 267 aaPredicted RBP11.53□□□□□ -0.56
CEP290-205ENST00000550962 GLRXP35754 106 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 OMPP47874 163 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 LIMS1P48059 325 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 EVX1P49640 407 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 ERVK-25P63136 954 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
CEP290-205ENST00000550962 HGFACQ04756 655 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 TNK1Q13470 666 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 TRIM25Q14258 630 aaKnown RBP11.53□□□□□ -0.56
CEP290-205ENST00000550962 FAM98BQ52LJ0 330 aaKnown RBP11.53□□□□□ -0.56
CEP290-205ENST00000550962 DNM1P34Q6PK57 102 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 SMARCD3Q6STE5 483 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 DPY19L2P2Q6ZN68 376 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 TRPM8Q7Z2W7 1104 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 LRRC18Q8N456 261 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 ZNF519Q8TB69 540 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 FANK1Q8TC84 345 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 FAM168AQ92567 244 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
CEP290-205ENST00000550962 MAGIXQ9H6Y5 334 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 ZNF224Q9NZL3 707 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
CEP290-205ENST00000550962 A0A1W2PPL8 197 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 C12orf71A8MTZ7 269 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 NDUFS8O00217 210 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 SNAP29O95721 258 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 F12P00748 615 aaPredicted RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 ZNF35P13682 527 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 APEHP13798 732 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 MSR1P21757 451 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 FPR3P25089 353 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 SLC6A6P31641 620 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 RAD52P43351 418 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 FMODQ06828 376 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 KRR1Q13601 381 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 DNAL1Q4LDG9 190 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 LCN8Q6JVE9 175 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 RPL13AP3Q6NVV1 102 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 CYP2R1Q6VVX0 501 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 TSEN54Q7Z6J9 526 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 MYPOPQ86VE0 399 aaPredicted RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 MEX3DQ86XN8 651 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 C1orf174Q8IYL3 243 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 NEU4Q8WWR8 484 aaPredicted RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 ASB9Q96DX5 294 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 REG4Q9BYZ8 158 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 BCL2L14Q9BZR8 327 aa11.52□□□□□ -0.57
CEP290-205ENST00000550962 HEATR1Q9H583 2144 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 EIF3KQ9UBQ5 218 aaKnown RBP11.52□□□□□ -0.57
CEP290-205ENST00000550962 PRSS37A4D1T9 235 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 RNF223E7ERA6 249 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 M0R233 179 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 NDUFS7O75251 213 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 CST2P09228 141 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 PATE4P0C8F1 98 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 NOS3P29474 1203 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 CRABP1P29762 137 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 CDAP32320 146 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 GDI2P50395 445 aaKnown RBP11.51□□□□□ -0.57
CEP290-205ENST00000550962 PDLIM4P50479 330 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 GK3PQ14409 553 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 MOGQ16653 247 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 RGS7BPQ6MZT1 257 aaPredicted RBP11.51□□□□□ -0.57
CEP290-205ENST00000550962 PGM2L1Q6PCE3 622 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 ARL9Q6T311 187 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 SYT9Q86SS6 491 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 JAZF1Q86VZ6 243 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 ZNF540Q8NDQ6 660 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 OR52L1Q8NGH7 329 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 GNPDA2Q8TDQ7 276 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 MRPL24Q96A35 216 aaKnown RBP11.51□□□□□ -0.57
CEP290-205ENST00000550962 NMD3Q96D46 503 aaKnown RBP11.51□□□□□ -0.57
CEP290-205ENST00000550962 Q96M85 177 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 ZNF75AQ96N20 296 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 MS4A5Q9H3V2 200 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 NRIP3Q9NQ35 241 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 FAM53CQ9NYF3 392 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 UGT2A1Q9Y4X1 527 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 TIMM10BQ9Y5J6 103 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
CEP290-205ENST00000550962 TEX13CA0A0J9YWL9 993 aa11.5□□□□□ -0.57
CEP290-205ENST00000550962 A0A1W2PPW3 197 aa11.5□□□□□ -0.57
CEP290-205ENST00000550962 TNFRSF11BO00300 401 aa11.5□□□□□ -0.57
CEP290-205ENST00000550962 IMPA2O14732 288 aa11.5□□□□□ -0.57
CEP290-205ENST00000550962 GYG2O15488 501 aa11.5□□□□□ -0.57
CEP290-205ENST00000550962 SYNGR3O43761 229 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms