RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 NANPQ8TBE9 248 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 TSPEARQ8WU66 669 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 ELMOD3Q96FG2 381 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 CGREF1Q99674 301 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 KCNN2Q9H2S1 579 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 KAT8Q9H7Z6 458 aaKnown RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 SIAEQ9HAT2 523 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 SMURF2Q9HAU4 748 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 MEPEQ9NQ76 525 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-221ENST00000550914 WIPI2Q9Y4P8 454 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 TGP01266 2768 aa10.94□□□□□ -0.66
PTCH1-221ENST00000550914 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 MCIDASD6RGH6 385 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 H3BSA7 217 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 TPD52L2O43399 206 aaKnown RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 MT-ND1P03886 318 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 OPN1SWP03999 348 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 ADH4P08319 380 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 TSPAN19P0C672 248 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 NR2C1P13056 603 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 LIPAP38571 399 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 RBM34P42696 430 aaKnown RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF81P51508 661 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 UGT2B15P54855 530 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 HSF2Q03933 536 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 SLC3A1Q07837 685 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF718Q3SXZ3 478 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 AVPI1Q5T686 147 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 AGBL2Q5U5Z8 902 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 DCAF12L2Q5VW00 463 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 TSPYL5Q86VY4 417 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 RBM45Q8IUH3 476 aaKnown RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 OR4D11Q8NGI4 311 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 OR1J1Q8NGS3 322 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 ASB10Q8WXI3 467 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 PRSS27Q9BQR3 290 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 POLR2J2Q9GZM3 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 POLR2J3Q9H1A7 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 OR51B6Q9H340 312 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 CGGBP1Q9UFW8 167 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-221ENST00000550914 NDUFAF1Q9Y375 327 aa10.93□□□□□ -0.66
PTCH1-221ENST00000550914 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 PLSCR5A0PG75 271 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 GMNCA6NCL1 334 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 ANGPT2O15123 496 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 ICMTO60725 284 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 ACADSP16219 412 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 EGR1P18146 543 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 STOMP27105 288 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 MMP15P51511 669 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 MTPNP58546 118 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 RPL18Q07020 188 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 CCDC80Q76M96 950 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 LRRC18Q8N456 261 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 SYT14Q8NB59 555 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 VANGL1Q8TAA9 524 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 LIPHQ8WWY8 451 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 TAMM41Q96BW9 452 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 NMD3Q96D46 503 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 POM121L2Q96KW2 1035 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 DIRC2Q96SL1 478 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 EGLN1Q9GZT9 426 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 CCNB1IP1Q9NPC3 277 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 INIPQ9NRY2 104 aa10.92□□□□□ -0.66
PTCH1-221ENST00000550914 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
PTCH1-221ENST00000550914 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-221ENST00000550914 OR7A10O76100 309 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 FSHBP01225 129 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 IGHV1-46P01743 117 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 F13BP05160 661 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 FUT1P19526 365 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 FPR2P25090 351 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 GCH1P30793 250 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 SELPLGQ14242 412 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 TAF11Q15544 211 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 TSTQ16762 297 aaKnown RBP10.91□□□□□ -0.66
PTCH1-221ENST00000550914 BEND6Q5SZJ8 279 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-221ENST00000550914 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 ZNF101Q8IZC7 436 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 BPIFB2Q8N4F0 458 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 GAL3ST1Q99999 423 aa10.91□□□□□ -0.66
PTCH1-221ENST00000550914 NANOGQ9H9S0 305 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms