RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GALNT16Q8N428 558 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 PBX4Q9BYU1 374 aa12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 TMEM184BQ9Y519 407 aaPredicted RBP12.77□□□□□ -0.36
RAPGEF3-218ENST00000548919 PCNX3Q9H6A9 2034 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 TNFRSF10CO14798 259 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 RENP00797 406 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 CLPSP04118 112 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 CSN2P05814 226 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 EGR3Q06889 387 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 RASGEF1BQ0VAM2 473 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 SQSTM1Q13501 440 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 ETFDHQ16134 617 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 MRPS24Q96EL2 167 aaKnown RBP12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 CGGBP1Q9UFW8 167 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF3-218ENST00000548919 LOC100289279A0A1B0GTE1 492 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 D6RAR5 112 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 ALOX12BO75342 701 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 OR4E1P0C645 316 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 HHEXQ03014 270 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 MFGE8Q08431 387 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 FUT7Q11130 342 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 NR0B2Q15466 257 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 ARMC6Q6NXE6 501 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TMEM184AQ6ZMB5 413 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 C19orf47Q8N9M1 422 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 OTOSQ8NHW6 89 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 MMABQ96EY8 250 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 UBQLN4Q9NRR5 601 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 FARSAQ9Y285 508 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 FREM3P0C091 2139 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 LRP4O75096 1905 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TOR1AO14656 332 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 ZNF432O94892 652 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TXNDC12O95881 172 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 HPP00738 406 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TPMTP51580 245 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 OR1J2Q8NGS2 313 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 SLC25A36Q96CQ1 311 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 SEH1LQ96EE3 360 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 ADOQ96SZ5 270 aa12.76□□□□□ -0.37
RAPGEF3-218ENST00000548919 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 CDC14CA4D256 554 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SLC17A2O00624 439 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SCDO00767 359 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 CLDN4O14493 209 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 ZNF264O43296 627 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 UTS2O95399 124 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 ITGB2P05107 769 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SPARCP09486 303 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 MAOBP27338 520 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 LRFN4Q6PJG9 635 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 NDUFAF7Q7L592 441 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 BOLLQ8N9W6 283 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 GPBAR1Q8TDU6 330 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 GPX8Q8TED1 209 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 LIPHQ8WWY8 451 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 ASB12Q8WXK4 309 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 AIFM2Q9BRQ8 373 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 NXF5Q9H1B4 397 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SEC16AO15027 2179 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 LOC100509620A0A075B734 347 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 DCDC2BA2VCK2 349 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 RFPL4AA6NLU0 287 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 C17orf105B2RV13 164 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 RFPL4AL1F8VTS6 287 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 CCSO14618 274 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 RAB3DO95716 219 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 AMY2AP04746 511 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 RPA2P15927 270 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SLC17A1Q14916 467 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 PRTGQ2VWP7 1150 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 SCGB2B2Q4G0G5 96 aa12.75□□□□□ -0.37
RAPGEF3-218ENST00000548919 GLYATL3Q5SZD4 288 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms