RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ZNF519Q8TB69 540 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 KCNE4Q8WWG9 221 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 FCGR1BQ92637 280 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 GGHQ92820 318 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 LRR1Q96L50 414 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 ZNF582Q96NG8 517 aaPredicted RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 TNFRSF13CQ96RJ3 184 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 SYT3Q9BQG1 590 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 PIGQQ9BRB3 760 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 SCNM1Q9BWG6 230 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 YIPF3Q9GZM5 350 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 ZDHHC11Q9H8X9 412 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 FGF20Q9NP95 211 aaPredicted RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 ACKR4Q9NPB9 350 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 HINT3Q9NQE9 182 aaKnown RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 SERINC1Q9NRX5 453 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 PAQR5Q9NXK6 330 aaPredicted RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 SCN3BQ9NY72 215 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 KLHL13Q9P2N7 655 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 KLHL21Q9UJP4 597 aa7.53□□□□□ -1.2
VPS29-203ENST00000546588 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS29-203ENST00000546588 DIMT1Q9UNQ2 313 aaKnown RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 KLF13Q9Y2Y9 288 aaPredicted RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 RPL36Q9Y3U8 105 aaKnown RBP7.53□□□□□ -1.2
VPS29-203ENST00000546588 AKAP13Q12802 2813 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 BSNQ9UPA5 3926 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 SMIM31A0A1B0GVY4 71 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 OR2M5A3KFT3 312 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 ARGFXA6NJG6 315 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 CENPBD1B2RD01 187 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 HSBP1L1C9JCN9 74 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 LRRN3E7EW58 273 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 PLPP3O14495 311 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 XPNPEP2O43895 674 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 ENTPD6O75354 484 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 HK1P19367 917 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 M6PRP20645 277 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 DPP4P27487 766 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 HTR1FP30939 366 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 FMO3P31513 532 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 RPS5P46782 204 aaKnown RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 PER3P56645 1201 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 RAB14P61106 215 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 SNAPC1Q16533 368 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 ALG10Q5BKT4 473 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 SLC35D3Q5M8T2 416 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 SYT6Q5T7P8 510 aaPredicted RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 C1QL3Q5VWW1 255 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 OR5M10Q6IEU7 315 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 FAM122CQ6P4D5 195 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 PAQR6Q6TCH4 344 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 PXKQ7Z7A4 578 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 GGNQ86UU5 652 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 MEX3DQ86XN8 651 aaKnown RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 DTX3Q8N9I9 347 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 NPEPL1Q8NDH3 523 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 OR51A7Q8NH64 312 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 RFKQ969G6 155 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 MYDGFQ969H8 173 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 MUL1Q969V5 352 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 KIRREL1Q96J84 757 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 DOK1Q99704 481 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 ZNF649Q9BS31 505 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 TAPBPLQ9BX59 468 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 FAM192AQ9GZU8 254 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 RACGAP1Q9H0H5 632 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 MARCH7Q9H992 704 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 CLN6Q9NWW5 311 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 GPR83Q9NYM4 423 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 TVP23BQ9NYZ1 205 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 VSX1Q9NZR4 365 aaPredicted RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 B3GAT1Q9P2W7 334 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 WARS2Q9UGM6 360 aaKnown RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 VDAC3Q9Y277 283 aa7.52□□□□□ -1.21
VPS29-203ENST00000546588 LSM2Q9Y333 95 aaKnown RBP7.52□□□□□ -1.21
VPS29-203ENST00000546588 TMEM129A0AVI4 362 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 PINLYPA6NC86 204 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 CCDC182A6NF36 153 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 AQP7P3A6NL99 342 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 GJE1A6NN92 205 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 KLRC4-KLRK1H3BQV0 150 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 RGS10O43665 173 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TLX2O43763 284 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 SEC14L2O76054 403 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IL18BPO95998 194 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IFNGP01579 166 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 ADRB1P08588 477 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IL11P20809 199 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TNFSF4P23510 183 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 POU1F1P28069 291 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 GRPRP30550 384 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 EIF2S3P41091 472 aaKnown RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 HTR2BP41595 481 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 PCP4P48539 62 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 DNASE1L1P49184 302 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms