RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 C12orf45Q8N5I9 185 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 NUBPLQ8TB37 319 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 PPP1R1CQ8WVI7 109 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CHRDQ9H2X0 955 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 TAS2R4Q9NYW5 299 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 TMEM272A0A1B0GTI8 110 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 TCRBV21S2A2A0A5A6 115 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SHISA8B8ZZ34 492 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 PMP2P02689 132 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 DAOP14920 347 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 C5AR1P21730 350 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 FGL1Q08830 312 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 DUSP8Q13202 625 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 TOMM34Q15785 309 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 CARD17Q5XLA6 110 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 DND1Q8IYX4 353 aaKnown RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 OR1S1Q8NH92 325 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 THAP6Q8TBB0 222 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 SCARB1Q8WTV0 552 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 DCUN1D4Q92564 292 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 OR2M4Q96R27 311 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 EMC6Q9BV81 110 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ACTR10Q9NZ32 417 aa13.3□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF223Q9UK11 482 aaPredicted RBP13.3□□□□□ -0.28
HOXC11-202ENST00000546378 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 IFNA6P05013 189 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 ZP3P21754 424 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 COX15Q7KZN9 410 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 BVESQ8NE79 360 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 SFXN5Q8TD22 340 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 METTL21AQ8WXB1 218 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 DOCK7Q96N67 2140 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 NPAS1Q99742 590 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 EPHX3Q9H6B9 360 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 SEC61A2Q9H9S3 476 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 EPHA6Q9UF33 1036 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 MRM2Q9UI43 246 aaKnown RBP13.29□□□□□ -0.28
HOXC11-202ENST00000546378 EMC9Q9Y3B6 208 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 MFSD2BA6NFX1 497 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 OR5H14A6NHG9 310 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 H3BML4 177 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 SLC25A12O75746 678 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 GPR75O95800 540 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 KNG1P01042 644 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 PGAM2P15259 253 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 DPP4P27487 766 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 ADPRHP54922 357 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 Q499Y3 187 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 CCDC157Q569K6 752 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 RNLSQ5VYX0 342 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
HOXC11-202ENST00000546378 OR6V1Q8N148 313 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 FAM3DQ96BQ1 224 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 SLC25A44Q96H78 314 aaPredicted RBP13.29□□□□□ -0.28
HOXC11-202ENST00000546378 ANKRD10Q9NXR5 420 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 PCDHB10Q9UN67 800 aa13.29□□□□□ -0.28
HOXC11-202ENST00000546378 OR14I1A6ND48 311 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 SDCBPO00560 298 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 WNT11O96014 354 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 SERPINA5P05154 406 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 MYF5P13349 255 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 SPINK2P20155 84 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 CLINT1Q14677 625 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ABHD13Q7L211 337 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 MFSD9Q8NBP5 474 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 INO80EQ8NBZ0 244 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 SELENOIQ9C0D9 397 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 TAS2R5Q9NYW4 299 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 A0A1B0GUH1 482 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 LINC01387J3KSC0 135 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 TXNL1O43396 289 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 KLF4O43474 513 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF432O94892 652 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 HOXB5P09067 269 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 OR4E1P0C645 316 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 CTSEP14091 401 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 HSD17B2P37059 387 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 IL13RA1P78552 427 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 PLAURQ03405 335 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 CD226Q15762 336 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF658BQ4V348 819 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 TMEM92Q6UXU6 159 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 C10orf90Q96M02 699 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ZFYVE21Q9BQ24 234 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 MBD2Q9UBB5 411 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 STEAP1Q9UHE8 339 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 VDAC3Q9Y277 283 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ABCA7Q8IZY2 2146 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 NME2P22392 152 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 FMODQ06828 376 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF626Q68DY1 528 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 NPEPL1Q8NDH3 523 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms