RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 OR11L1Q8NGX0 322 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 NTN4Q9HB63 628 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 A0A0B4J2A0 478 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 UPK1AO00322 258 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 LILRB5O75023 590 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 RGS11O94810 467 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 CTSLP07711 333 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 EVX1P49640 407 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 CLDN20P56880 219 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 HSF1Q00613 529 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 THEM4Q5T1C6 240 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 GDPD3Q7L5L3 318 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 GRAMD2AQ8IUY3 354 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 ADGRF3Q8IZF5 1079 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 MAML2Q8IZL2 1156 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-209ENST00000545689 SHPKQ9UHJ6 478 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-209ENST00000545689 TRAPPC2LQ9UL33 140 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 ETHE1O95571 254 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 RPL35P42766 123 aaKnown RBP11.46□□□□□ -0.57
COL4A6-209ENST00000545689 THBS3P49746 956 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 HTD2P86397 168 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 SYT9Q86SS6 491 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.57
COL4A6-209ENST00000545689 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 FRG2CA6NGY1 282 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 CITO14578 2027 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 TAAR5O14804 337 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 CAPZBP47756 277 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 B4GALNT1Q00973 533 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF74Q16587 644 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 OR1M1Q8NGA1 313 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 ELF4Q99607 663 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-209ENST00000545689 GLSO94925 669 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-209ENST00000545689 GALP22466 123 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 FAM53BQ14153 422 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 CDK5R1Q15078 307 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 OR5T1Q8NG75 326 aa11.46□□□□□ -0.58
COL4A6-209ENST00000545689 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.58
COL4A6-209ENST00000545689 C4orf47A7E2U8 309 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR2F2O95006 317 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SNRNP70P08621 437 aaKnown RBP11.45□□□□□ -0.58
COL4A6-209ENST00000545689 RAB4BP61018 213 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR2F1Q13607 317 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 IL10RAQ13651 578 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SLAMF9Q96A28 289 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 TUBAL3A6NHL2 446 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 M0QYG6 137 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 DSCR3O14972 297 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 MPPED1O15442 326 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 B3GALT4O96024 378 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 IL32P24001 234 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SUMO3P55854 103 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-209ENST00000545689 BEX5Q5H9J7 111 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 TMEM178AQ8NBL3 297 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SEMA6DQ8NFY4 1073 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR6K3Q8NGY3 331 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 WDR34Q96EX3 536 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 UBL7Q96S82 380 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-209ENST00000545689 BCO1Q9HAY6 547 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 LOC107986453A0A1B0GWG9 222 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SSX4O60224 188 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR1D5P58170 312 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 LFNGQ8NES3 379 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR2A1Q8NGT9 310 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 TERB2Q8NHR7 220 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PDCD1LG2Q9BQ51 273 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SLC6A17Q9H1V8 727 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 KCND3Q9UK17 655 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 TRAPPC4Q9Y296 219 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PIGLQ9Y2B2 252 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SNRPGP15A8MWD9 76 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 KLRC4-KLRK1H3BQV0 150 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 M0R082 166 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PMP2P02689 132 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 CTXN2P0C2S0 81 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SELENBP1Q13228 472 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PLGLAQ15195 96 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 STK11Q15831 433 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 AGBL4Q5VU57 503 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 BHLHA9Q7RTU4 235 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 ANGPTL5Q86XS5 388 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 OR4D6Q8NGJ1 314 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 C6orf106Q9H6K1 298 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-209ENST00000545689 PNLIPRP2P54317 469 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF813Q6ZN06 617 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 DND1Q8IYX4 353 aaKnown RBP11.45□□□□□ -0.58
COL4A6-209ENST00000545689 SEC22CQ9BRL7 303 aa11.45□□□□□ -0.58
COL4A6-209ENST00000545689 ASPDHA6ND91 283 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 OR6C6A6NF89 314 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SHOXO15266 292 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 PDGFAP04085 211 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SELEP16581 610 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 HYAL4Q2M3T9 481 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF683Q8IZ20 524 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms