RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SLC22A2O15244 555 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 CFLARO15519 480 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 XPNPEP2O43895 674 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 CCDC22O60826 627 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 UBL3O95164 117 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 BTG1P62324 171 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 GNB2P62879 340 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 HBA1P69905 142 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 EPS8Q12929 822 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 MSANTD1Q6ZTZ1 278 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 ROPN1LQ96C74 230 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 OXGR1Q96P68 337 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 DENND2DQ9H6A0 471 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 NANOGQ9H9S0 305 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 TANC2Q9HCD6 1990 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 CSMD3Q7Z407 3707 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 CFAP73A6NFT4 308 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 NPIPB7O75200 414 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 TSPAN9O75954 239 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 SFTPBP07988 381 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 ALDOCP09972 364 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 GKN3PP0CG01 181 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 NCF2P19878 526 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 S100A3P33764 101 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 GYS2P54840 703 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 PMS2P3Q13401 168 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 MOGQ16653 247 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 CADM2Q8N3J6 435 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 TSPEARQ8WU66 669 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 MOAP1Q96BY2 351 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 DUSP26Q9BV47 211 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 CDH20Q9HBT6 801 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
CLSTN3-216ENST00000545663 A0A0U1RQK1 487 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 C3orf84H3BNL1 204 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 FAAHO00519 579 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 RNASET2O00584 256 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 SNX3O60493 162 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 ZNF205O95201 554 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 FAM107AO95990 144 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 HLA-DOBP13765 273 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 IGLL1P15814 213 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 MAPRE2Q15555 327 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 THEM4Q5T1C6 240 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 DHRS7BQ6IAN0 325 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 TNFAIP8L2Q6P589 184 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 MUC20Q8N307 709 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 KRTCAP2Q8N6L1 136 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 FITM2Q8N6M3 262 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 CPEB3Q8NE35 698 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 OR1J1Q8NGS3 322 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 TXNDC15Q96J42 360 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 SLC35G5Q96KT7 338 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 FOXB1Q99853 325 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 NUDT16L1Q9BRJ7 211 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 MMP28Q9H239 520 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 RMND5AQ9H871 391 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 TMEM165Q9HC07 324 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 MSL2Q9HCI7 577 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 RLIMQ9NVW2 624 aa12.79□□□□□ -0.36
CLSTN3-216ENST00000545663 CENPVL3A0A0U1RRI6 287 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 PRSS51A0A1B0GVH4 220 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 PLSCR5A0PG75 271 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 MGRN1O60291 552 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 MFN2O95140 757 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 HPRP00739 348 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 C1QCP02747 245 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 BPIFB3P59826 476 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 PGS1Q32NB8 556 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 NSUN5P1Q3KNT7 163 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 GDPGP1Q6ZNW5 385 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 ZNF283Q8N7M2 679 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 C10orf82Q8WW14 230 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 CFHR4Q92496 578 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 THOC1Q96FV9 657 aaKnown RBP12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 ARHGDIGQ99819 225 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 B9D2Q9BPU9 175 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 CDADC1Q9BWV3 514 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 FAM107BQ9H098 131 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 ARL2BPQ9Y2Y0 163 aa12.78□□□□□ -0.36
CLSTN3-216ENST00000545663 RNF103-CHMP3A0A140T963 221 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 M0R082 166 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 GUSBP08236 651 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 ACAA2P42765 397 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms