RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 PDIK1LQ8N165 341 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 OTUD6BQ8N6M0 293 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 CREB3L1Q96BA8 519 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 SLC2A8Q9NY64 477 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 STARD10Q9Y365 291 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
COPA-206ENST00000545266 AKNAQ7Z591 1439 aa3.17□□□□□ -1.9
COPA-206ENST00000545266 BET1O15155 118 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 ENTPD5O75356 428 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 RP2O75695 350 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 SNX4O95219 450 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 CTDNEP1O95476 244 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 RAB3DO95716 219 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 CCNHP51946 323 aaPredicted RBP3.16□□□□□ -1.9
COPA-206ENST00000545266 LRRC74AQ0VAA2 488 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 MOBPQ13875 183 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 TGFBIQ15582 683 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 CCDC73Q6ZRK6 1079 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 BIVMQ86UB2 503 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 MMAAQ8IVH4 418 aaKnown RBP3.16□□□□□ -1.9
COPA-206ENST00000545266 FBXL13Q8NEE6 735 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 SPATA4Q8NEY3 305 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 B3GNT7Q8NFL0 401 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 TPD52L3Q96J77 140 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 PARP12Q9H0J9 701 aaKnown RBP3.16□□□□□ -1.9
COPA-206ENST00000545266 ZNF430Q9H8G1 570 aaPredicted RBP3.16□□□□□ -1.9
COPA-206ENST00000545266 ZNF629Q9UEG4 869 aaPredicted RBP3.16□□□□□ -1.9
COPA-206ENST00000545266 CTNNA3Q9UI47 895 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 ING4Q9UNL4 249 aa3.16□□□□□ -1.9
COPA-206ENST00000545266 CNTNAP1P78357 1384 aa3.15□□□□□ -1.9
COPA-206ENST00000545266 XKRY2A2RUG3 117 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 PSMC3P17980 439 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 PBLDP30039 288 aaPredicted RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 HNRNPH3P31942 346 aaKnown RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 CDKN2BP42772 138 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 NSG1P42857 185 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 NUTF2P61970 127 aaKnown RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 RABL6Q3YEC7 729 aaPredicted RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 VPS26BQ4G0F5 336 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 LY6G6FQ5SQ64 297 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 RNASEKQ6P5S7 137 aaKnown RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 ZNF836Q6ZNA1 936 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 NTM-AS1Q6ZSK4 140 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 NIPA1Q7RTP0 329 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 OR10J6PQ8NGY7 276 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 OR5W2Q8NH69 310 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 KCNG3Q8TAE7 436 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 CXorf40AQ8TE69 158 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 ZNF681Q96N22 645 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 SPIN2AQ99865 258 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 SPIN2BQ9BPZ2 258 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 SCRT1Q9BWW7 348 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 UBE2ZQ9H832 354 aaPredicted RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 HPCAL4Q9UM19 191 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 MRPS18BQ9Y676 258 aaKnown RBP3.15□□□□□ -1.91
COPA-206ENST00000545266 MAPK8IP3Q9UPT6 1336 aa3.15□□□□□ -1.91
COPA-206ENST00000545266 IGHV5-10-1A0A0J9YXX1 117 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 ZNF705GA8MUZ8 300 aaPredicted RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 EEDO75530 441 aaKnown RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 CLPXO76031 633 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 SRP72O76094 671 aaKnown RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 AIFM1O95831 613 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 MRPL3P09001 348 aaKnown RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 IGHV1-8P0DP01 117 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 PRPS2P11908 318 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 NAMPTP43490 491 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 ESRRGP62508 458 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 SASS6Q6UVJ0 657 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 NANOGNBQ7Z5D8 188 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 OR2L8Q8NGY9 312 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 FAM3DQ96BQ1 224 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 DUS3LQ96G46 650 aaKnown RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 NDFIP1Q9BT67 221 aa3.14□□□□□ -1.91
COPA-206ENST00000545266 PSMC3IPQ9P2W1 217 aaPredicted RBP3.14□□□□□ -1.91
COPA-206ENST00000545266 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 TCP11X1B4DZS4 312 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 TSPAN13O95857 204 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 FOXN2P32314 431 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 ZNF138P52744 262 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 YWHAGP61981 247 aaKnown RBP eCLIP3.13□□□□□ -1.91
COPA-206ENST00000545266 ERCC8Q13216 396 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 FAM228AQ86W67 206 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 SLC22A9Q8IVM8 553 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 UBALD2Q8IYN6 164 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 LIX1Q8N485 282 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 EID2Q8N6I1 236 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 DEDD2Q8WXF8 326 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 FRZBQ92765 325 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 CNDP1Q96KN2 507 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 ATP5SQ99766 215 aa3.13□□□□□ -1.91
COPA-206ENST00000545266 FGF20Q9NP95 211 aaPredicted RBP3.13□□□□□ -1.91
COPA-206ENST00000545266 LSM7Q9UK45 103 aaKnown RBP3.13□□□□□ -1.91
COPA-206ENST00000545266 GPATCH8Q9UKJ3 1502 aaKnown RBP3.13□□□□□ -1.91
COPA-206ENST00000545266 USP47Q96K76 1375 aa3.12□□□□□ -1.91
COPA-206ENST00000545266 CIB4A0PJX0 185 aa3.12□□□□□ -1.91
COPA-206ENST00000545266 TMEM150BA6NC51 233 aa3.12□□□□□ -1.91
COPA-206ENST00000545266 ZNF716A6NP11 495 aa3.12□□□□□ -1.91
COPA-206ENST00000545266 BOLA2-SMG1P6H3BVE0 249 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms