RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LCN1P31025 176 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 BSGP35613 385 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 NCS1P62166 190 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 B4GALNT1Q00973 533 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 FOXK2Q01167 660 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ESPNLQ6ZVH7 1005 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF695Q8IW36 515 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 OLIG1Q8TAK6 271 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 HSD17B8Q92506 261 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ALG14Q96F25 216 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 NICN1Q9BSH3 213 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 EMC6Q9BV81 110 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 LAT2Q9GZY6 243 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 MED20Q9H944 212 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 RASD1Q9Y272 281 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF281Q9Y2X9 895 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 PCDHGA5Q9Y5G8 931 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 COL24A1Q17RW2 1714 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SCN4AP35499 1836 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM212A6NML5 194 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 E9PI62 339 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 LY86O95711 162 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 PEX11BO96011 259 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ITGAMP11215 1152 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CDK2P24941 298 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 RPL35P42766 123 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 KIR2DL3P43628 341 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 DUSP2Q05923 314 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 SGPP2Q8IWX5 399 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM102Q8N9M5 508 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 Q96M85 177 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 KCNK17Q96T54 332 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 GDF15Q99988 308 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF696Q9H7X3 374 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 OLAHQ9NV23 265 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 TRAPPC2LQ9UL33 140 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 USP22Q9UPT9 525 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 COL4A5P29400 1685 aa6.31□□□□□ -1.4
SRGAP1-206ENST00000543397 IGHV5-51A0A0C4DH38 117 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF736B4DX44 427 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF780AO75290 641 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 IFNA7P01567 189 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 TK1P04183 234 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 RPL27P61353 136 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HSF1Q00613 529 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 LTC4SQ16873 150 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 C9orf152Q5JTZ5 239 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 COX15Q7KZN9 410 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 GLB1L2Q8IW92 636 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 MRGPRX4Q96LA9 322 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PRR14Q9BWN1 585 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 FSCN3Q9NQT6 498 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A087WZY1 265 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1B0GTQ1 180 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1W2PQL4 384 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A4D1N5 150 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 FRG2CA6NGY1 282 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 CHRNB1P11230 501 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 FOLR1P15328 257 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 RAB31Q13636 194 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PLK5Q496M5 336 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HACD4Q5VWC8 232 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SAXO2Q658L1 398 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SFRP4Q6FHJ7 346 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 CGB2Q6NT52 195 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 BRWD3Q6RI45 1802 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 BHLHA9Q7RTU4 235 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC46A3Q7Z3Q1 461 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SKA3Q8IX90 412 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 NT5CQ8TCD5 201 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 CMSS1Q9BQ75 279 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 WWTR1Q9GZV5 400 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2S2Q9NQN1 319 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 POLE4Q9NR33 117 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SEMA4GQ9NTN9 838 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 STEAP1Q9UHE8 339 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 COL5A3P25940 1745 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SPAARA0A1B0GVQ0 90 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2A25A4D2G3 310 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SULT1C2O00338 296 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 CDK1P06493 297 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 YES1P07947 543 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 EDDM3BP56851 147 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 GRB2P62993 217 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 MEP1BQ16820 701 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF766Q5HY98 468 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 GSG1LQ6UXU4 331 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ADGRF3Q8IZF5 1079 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF511Q8NB15 262 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR1L3Q8NH93 324 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 STOML3Q8TAV4 291 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2A14Q96R47 310 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM173AQ9BQD7 235 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms