RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 SLC22A24Q8N4F4 322 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 IQCF1Q8N6M8 205 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 ZNF555Q8NEP9 628 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 SDR9C7Q8NEX9 313 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 ZNF837Q96EG3 531 aaPredicted RBP10.68□□□□□ -0.7
DDX55-210ENST00000543016 MED18Q9BUE0 208 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 NMNAT2Q9BZQ4 307 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 NUAK2Q9H093 628 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 NELFAQ9H3P2 528 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 TVP23BQ9NYZ1 205 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 NKX1-2Q9UD57 310 aaPredicted RBP10.68□□□□□ -0.7
DDX55-210ENST00000543016 KCNG2Q9UJ96 466 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 UGT2A1Q9Y4X1 527 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
DDX55-210ENST00000543016 HCFC1P51610 2035 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 PRR23D1E9PI22 279 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 E9PQ18 207 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 H7C1C5 153 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 SLC16A6O15403 523 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 PRODHO43272 600 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 MPZL2O60487 215 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 UBL3O95164 117 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 SLC2A10O95528 541 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 HRGP04196 525 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 PRR23D2P0DMB1 279 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 COX6B1P14854 86 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 MSR1P21757 451 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 FOXG1P55316 489 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 PCBD1P61457 104 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 LSM6P62312 80 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 LCN6P62502 163 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 FMODQ06828 376 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 CRMP1Q14194 572 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 DAZAP2Q15038 168 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 PPA1Q15181 289 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 TAB1Q15750 504 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 KCNMB1Q16558 191 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 LRRC36Q1X8D7 754 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 SLC36A2Q495M3 483 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 C9orf135Q5VTT2 229 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 TTC23Q5W5X9 447 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 LPCAT4Q643R3 524 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 SP5Q6BEB4 398 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 MEX3BQ6ZN04 569 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 OR6V1Q8N148 313 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 OR8J1Q8NGP2 316 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 NSMAFQ92636 917 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 PITX2Q99697 317 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 TOR3AQ9H497 397 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 SRA1Q9HD15 236 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 RPRD1BQ9NQG5 326 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 POLE4Q9NR33 117 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 PLEKHB1Q9UF11 243 aaPredicted RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 NDRG4Q9ULP0 352 aaKnown RBP10.67□□□□□ -0.7
DDX55-210ENST00000543016 SLC25A15Q9Y619 301 aa10.67□□□□□ -0.7
DDX55-210ENST00000543016 IGLV1-36A0A0B4J1U3 117 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 IGKV1D-43A0A0B4J1Z2 117 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 A1L4Q6 167 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 C12orf71A8MTZ7 269 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 H0YAE9 185 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 C19orf84I3L1E1 186 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 SNAP29O95721 258 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 CST2P09228 141 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 B4GALT1P15291 398 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 CRYGSP22914 178 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 EPHA2P29317 976 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 GGT2P36268 569 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 ARR3P36575 388 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 POLR2IP36954 125 aaKnown RBP10.66□□□□□ -0.7
DDX55-210ENST00000543016 EFNB1P98172 346 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 HSF2Q03933 536 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 KEAP1Q14145 624 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 SLC35D3Q5M8T2 416 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 SLC25A30Q5SVS4 291 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 TMEM236Q5W0B7 351 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 WDR31Q8NA23 367 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 CYB561A3Q8NBI2 242 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 PROKR2Q8NFJ6 384 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 PTP4A1Q93096 173 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 APOL4Q9BPW4 351 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 SEC61A2Q9H9S3 476 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 FAM118AQ9NWS6 357 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 IMPAD1Q9NX62 359 aa10.66□□□□□ -0.7
DDX55-210ENST00000543016 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
DDX55-210ENST00000543016 COA3Q9Y2R0 106 aaPredicted RBP10.66□□□□□ -0.7
DDX55-210ENST00000543016 A0A096LPE4 126 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 LOC100130705A0A1B0GUX0 176 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 A0A1W2PPL8 197 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 A0A1W2PPZ6 126 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 TLX2O43763 284 aaPredicted RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 TMCC2O75069 709 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 GLCEO94923 617 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 PTHP01270 115 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 CBR1P16152 277 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 SPI1P17947 270 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms