RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.27
DDX55-209ENST00000542286 UBE2ZQ9H832 354 aaPredicted RBP13.33□□□□□ -0.27
DDX55-209ENST00000542286 SLC22A11Q9NSA0 550 aa13.33□□□□□ -0.27
DDX55-209ENST00000542286 FGF21Q9NSA1 209 aa13.33□□□□□ -0.27
DDX55-209ENST00000542286 NPFFR2Q9Y5X5 522 aa13.33□□□□□ -0.27
DDX55-209ENST00000542286 MEIS3P1A6NDR6 274 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 IFITM5A6NNB3 132 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 PLATP00750 562 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 IFI6P09912 130 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 PNMTP11086 282 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 C4BPBP20851 252 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 GDNFP39905 211 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 HACD4Q5VWC8 232 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 PELOQ9BRX2 385 aaKnown RBP13.33□□□□□ -0.28
DDX55-209ENST00000542286 MED9Q9NWA0 146 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 MYEF2Q9P2K5 600 aaKnown RBP13.33□□□□□ -0.28
DDX55-209ENST00000542286 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
DDX55-209ENST00000542286 TRABD2BA6NFA1 517 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 L7N2F9 121 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 PDCD5O14737 125 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SERPINA3P01011 423 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 CD53P19397 219 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 RAG2P55895 527 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SNTB2Q13425 540 aaKnown RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 ALKAL2Q6UX46 152 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 TMPRSS12Q86WS5 348 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 GLB1L2Q8IW92 636 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 UQCC2Q9BRT2 126 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 OR5V1Q9UGF6 321 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 FBXL2Q9UKC9 423 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 UBL3O95164 117 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ADH7P40394 386 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 FBXW4P57775 412 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ACKR1Q16570 336 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 NSMAFQ92636 917 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 GPX7Q96SL4 187 aaPredicted RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 PTDSS2Q9BVG9 487 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 PRELID3BQ9Y3B1 194 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 CPED1A4D0V7 1026 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 SLC16A7O60669 478 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ABHD16AO95870 558 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 FMODQ06828 376 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 INPP5JQ15735 1006 aaPredicted RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 COL13A1Q5TAT6 717 aaPredicted RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 SLC6A19Q695T7 634 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 Q6ZTK2 550 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ZNF676Q8N7Q3 588 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 TEX19Q8NA77 164 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ACTR6Q9GZN1 396 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 ADAM19Q9H013 955 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
DDX55-209ENST00000542286 AKIRIN1Q9H9L7 192 aaPredicted RBP13.32□□□□□ -0.28
DDX55-209ENST00000542286 PLSCR5A0PG75 271 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 SUSD5O60279 629 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 PNPP00491 289 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 BGLAPP02818 100 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 SPARCP09486 303 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 CTLA4P16410 223 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 DPP4P27487 766 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 EFNB2P52799 333 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 EPHA4P54764 986 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 FOXK1P85037 733 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 ALKBH1Q13686 389 aaKnown RBP13.31□□□□□ -0.28
DDX55-209ENST00000542286 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 FAM220AQ7Z4H9 259 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 CDC20BQ86Y33 519 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 BVESQ8NE79 360 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 ADAMTS18Q8TE60 1221 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 METTL21AQ8WXB1 218 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 TMEM106AQ96A25 262 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 ARL5BQ96KC2 179 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 SLC19A3Q9BZV2 496 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 OR10A4Q9H209 315 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 NUP210LQ5VU65 1888 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 TSPAN2O60636 221 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 SLC25A12O75746 678 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 APOC3P02656 99 aa13.31□□□□□ -0.28
DDX55-209ENST00000542286 FGF2P09038 288 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms