RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 CDC26Q8NHZ8 85 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 LINC01560Q8TB33 94 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 RBM24Q9BX46 236 aaKnown RBP7.06□□□□□ -1.28
MRPS35-204ENST00000542199 ZFP57Q9NU63 452 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 C1orf109Q9NX04 203 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 FAM120CQ9NX05 1096 aaKnown RBP7.06□□□□□ -1.28
MRPS35-204ENST00000542199 FLRT3Q9NZU0 649 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 RPH3AQ9Y2J0 694 aaPredicted RBP7.06□□□□□ -1.28
MRPS35-204ENST00000542199 MED12LQ86YW9 2145 aa7.06□□□□□ -1.28
MRPS35-204ENST00000542199 SONP18583 2426 aaKnown RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 A0A1W2PNV4 684 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 A0A1W2PPI3 338 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 TRIM77I1YAP6 450 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 AZIN1O14977 448 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 SCO2O43819 266 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 SEC22BO75396 215 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 CRCPO75575 148 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 CRHP06850 196 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 DANCRP0C864 163 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 NEFHP12036 1026 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 SDC1P18827 310 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 FRKP42685 505 aaPredicted RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 HSPB3Q12988 150 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 GAGE5Q13069 117 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 GAGE6Q13070 117 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 PDE7AQ13946 482 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 ZNHIT3Q15649 155 aaPredicted RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 PAMR1Q6UXH9 720 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 APOOLQ6UXV4 268 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 LUZP2Q86TE4 346 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 TGIF2LYQ8IUE0 185 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 GRAMD2AQ8IUY3 354 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 C4orf33Q8N1A6 199 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 CHDHQ8NE62 594 aaPredicted RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 DMBX1Q8NFW5 382 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 OR2T11Q8NH01 316 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 MOSPD2Q8NHP6 518 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 GOT1L1Q8NHS2 421 aaPredicted RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 UBLCP1Q8WVY7 318 aaPredicted RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 CCT7Q99832 543 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 DSN1Q9H410 356 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 TUBB1Q9H4B7 451 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 PLEKHF2Q9H8W4 249 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 LRTM1Q9HBL6 345 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 MED11Q9P086 117 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 KCNG2Q9UJ96 466 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 OSGIN1Q9UJX0 560 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 PLEKHA6Q9Y2H5 1048 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 TMED5Q9Y3A6 229 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 GRIP1Q9Y3R0 1128 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 DNAJC15Q9Y5T4 150 aa7.05□□□□□ -1.28
MRPS35-204ENST00000542199 FN1P02751 2386 aaKnown RBP7.05□□□□□ -1.28
MRPS35-204ENST00000542199 MXRA5Q9NR99 2828 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 HIVEP2P31629 2446 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 A0A1W2PPR1 153 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 A0A1W2PRQ8 180 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 SLC22A20A6NK97 555 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 SMIM23A6NLE4 172 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 H0YC42 278 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 SLC28A1O00337 649 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 LSM1O15116 133 aaKnown RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 UTS2O95399 124 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 ANGPTL1O95841 491 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 IGKV1D-16P01601 117 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 CRYAAP02489 173 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 NUDT17P0C025 328 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 PRPS2P11908 318 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 TCEA1P23193 301 aaKnown RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 GABRA3P34903 492 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 HOXA1P49639 335 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 SUCLG1P53597 346 aaKnown RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 PSMD4P55036 377 aaKnown RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 DIO3P55073 304 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 STX5Q13190 355 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 GUSBP1Q15486 140 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 TMEM44Q2T9K0 475 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 VWC2Q2TAL6 325 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 UGT3A2Q3SY77 523 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 GLYR1Q49A26 553 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 RFTN2Q52LD8 501 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 RAET1LQ5VY80 246 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 CST9LP1Q5W188 147 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 OR2A2Q6IF42 318 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 ANKRD26P1Q6NSI1 321 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 MARCH3Q86UD3 253 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 BANPQ8N9N5 519 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 CDRT4Q8N9R6 151 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 CCDC63Q8NA47 563 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 CIDECQ96AQ7 238 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 STARD4Q96DR4 205 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 GIMAP5Q96F15 307 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 ZBED6CLQ96FA7 236 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 ST6GAL2Q96JF0 529 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 PIGQQ9BRB3 760 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 TRAF4Q9BUZ4 470 aaPredicted RBP7.04□□□□□ -1.28
MRPS35-204ENST00000542199 REEP4Q9H6H4 257 aa7.04□□□□□ -1.28
MRPS35-204ENST00000542199 PTGES2Q9H7Z7 377 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms