RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 STEAP1BQ6NZ63 245 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 LRRTM1Q86UE6 522 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 ELOVL3Q9HB03 270 aa13.88□□□□□ -0.19
CNOT9-208ENST00000542068 EXOSC3Q9NQT5 275 aaKnown RBP13.88□□□□□ -0.19
CNOT9-208ENST00000542068 A0A087WV62 115 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 SNRPGP15A8MWD9 76 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 H7C417 338 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 RPL35P42766 123 aaKnown RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 BIKQ13323 160 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 CD226Q15762 336 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 SLC6A19Q695T7 634 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 SLC36A1Q7Z2H8 476 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 KRT77Q7Z794 578 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 CDH26Q8IXH8 852 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 JAGN1Q8N5M9 183 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 STEAP2Q8NFT2 490 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 TSLPQ969D9 159 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 RNF166Q96A37 237 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 KTI12Q96EK9 354 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF426Q9BUY5 554 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 MTFP1Q9UDX5 166 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 A6NCN8 305 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 SERINC4A6NH21 518 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 ALOX12BO75342 701 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 CALCBP10092 127 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 RBM34P42696 430 aaKnown RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 FZD2Q14332 565 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 ETFDHQ16134 617 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 KDM8Q8N371 416 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 TMEM185AQ8NFB2 350 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 TSTD1Q8NFU3 115 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 OR1J2Q8NGS2 313 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF524Q96C55 264 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 LCORQ96JN0 433 aaPredicted RBP13.87□□□□□ -0.19
CNOT9-208ENST00000542068 CMKLR1Q99788 373 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 APMAPQ9HDC9 416 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 STEAP1Q9UHE8 339 aa13.87□□□□□ -0.19
CNOT9-208ENST00000542068 XRCC3O43542 346 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 RAB3DO95716 219 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 AK1P00568 194 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 IL5P05113 134 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 AKAIN1P0CW23 69 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 CAPZA2P47755 286 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 SPOCK1Q08629 439 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 HLA-DQA1Q5Y7H0 255 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 SLC16A9Q7RTY1 509 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 GALNT16Q8N428 558 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 FAM3DQ96BQ1 224 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 MRPS24Q96EL2 167 aaKnown RBP13.86□□□□□ -0.19
CNOT9-208ENST00000542068 CDCA3Q99618 268 aaPredicted RBP13.86□□□□□ -0.19
CNOT9-208ENST00000542068 DPYSL5Q9BPU6 564 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 FBXL21Q9UKT6 434 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 KNTC1P50748 2209 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 EML5Q05BV3 1969 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 SULT1B1O43704 296 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 CDC40O60508 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
CNOT9-208ENST00000542068 B3GALNT1O75752 331 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 OR6A2O95222 327 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 IGHV4-34P06331 123 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 MAP3K8P41279 467 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 ZP2Q05996 745 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 GGTLC2Q14390 218 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 WDR38Q5JTN6 314 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 RHOUQ7L0Q8 258 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 KCTD9Q7L273 389 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 PRSS35Q8N3Z0 413 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 BCORP1Q8N888 145 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 WDR13Q9H1Z4 485 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 FREM3P0C091 2139 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 IGKV1D-42A0A075B6H8 117 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 SCDO00767 359 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 CD14P08571 375 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 IL32P24001 234 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 MAPK3P27361 379 aaPredicted RBP13.86□□□□□ -0.19
CNOT9-208ENST00000542068 SKP1P63208 163 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 MC2RQ01718 297 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 RPL18Q07020 188 aaKnown RBP13.86□□□□□ -0.19
CNOT9-208ENST00000542068 PXT1Q8NFP0 134 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 FAM46BQ96A09 425 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 LPAR4Q99677 370 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 LRRC61Q9BV99 259 aa13.86□□□□□ -0.19
CNOT9-208ENST00000542068 KIR2DS5A0A0G2JLQ3 304 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 A0A0G2JNG1 304 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 SPTY2D1-AS1A0A0U1RR47 76 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 PRR19A6NJB7 356 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 OR4C45A6NMZ5 311 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 A8MXK9 166 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 KIR2DS3K7RE56 304 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF749O43361 778 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 PSMD4P55036 377 aaKnown RBP13.85□□□□□ -0.19
CNOT9-208ENST00000542068 KIR2DS5Q14953 304 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 RAB11BQ15907 218 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 VWA2Q5GFL6 755 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 C12orf45Q8N5I9 185 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms