RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PRSS37A4D1T9 235 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 TRIM64A6NGJ6 449 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 TRIM64BA6NI03 449 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 A6NIZ1 184 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 AQP12BA6NM10 295 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 DCTN6O00399 190 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 SOCS2O14508 198 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 MPZL1O95297 269 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 PPP1R3DO95685 299 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 GPANK1O95872 356 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 TXNDC12O95881 172 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 IGHV4-39P01824 125 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CRYAAP02489 173 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 TP53P04637 393 aaPredicted RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 SERPINA5P05154 406 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 OR4A8P0C604 315 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 RAP2AP10114 183 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CD99P14209 185 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CTLA4P16410 223 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 NR4A1P22736 598 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 PAX7P23759 505 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 LAP3P28838 519 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ZNF84P51523 738 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ATP5J2P56134 94 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 RAP1BP61224 184 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 RAP1AP62834 184 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 TSPAN31Q12999 210 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ENDOGQ14249 297 aaKnown RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 MICAQ29983 383 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 NRN1LQ496H8 165 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 DNAL1Q4LDG9 190 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 FAM98BQ52LJ0 330 aaKnown RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 ZNF362Q5T0B9 420 aaPredicted RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 FAM27BQ5VT28 67 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 AGAP6Q5VW22 663 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 SHEQ5VZ18 495 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 OR2T5Q6IEZ7 315 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ZNF544Q6NX49 715 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 FOXL2NBQ6ZUU3 175 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 SLC16A14Q7RTX9 510 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 HDDC2Q7Z4H3 204 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 AQP12AQ8IXF9 295 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 OR8D4Q8NGM9 314 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 OR2T29Q8NH02 315 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 GNPDA2Q8TDQ7 276 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 LRGUKQ96M69 825 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ZNF570Q96NI8 536 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 DDOQ99489 341 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 PLA2G12AQ9BZM1 189 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 OR52D1Q9H346 318 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CXorf56Q9H5V9 222 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 DENND2DQ9H6A0 471 aaPredicted RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 CA10Q9NS85 328 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 CBLN4Q9NTU7 201 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 VSX1Q9NZR4 365 aaPredicted RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 STX18Q9P2W9 335 aaKnown RBP8.41□□□□□ -1.06
YBX3-212ENST00000542002 TMCC3Q9ULS5 477 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 ITPR3Q14573 2671 aa8.41□□□□□ -1.06
YBX3-212ENST00000542002 LOC100509620A0A075B734 347 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 DHRS12A0PJE2 317 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 GPRIN2O60269 458 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 SLC16A7O60669 478 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 CCNB2O95067 398 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 UBL3O95164 117 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 HIST1H1CP16403 213 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 ZNF32P17041 273 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 NPR2P20594 1047 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 SDHAP31040 664 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 SERPINF1P36955 418 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 PSG4Q00888 419 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 KRR1Q13601 381 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 FAM205BPQ63HN1 556 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 GPR139Q6DWJ6 353 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 KRT80Q6KB66 452 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 ZNF620Q6ZNG0 422 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 DNM1P46Q6ZS02 220 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 LRP11Q86VZ4 500 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 HS3ST5Q8IZT8 346 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 FBXL14Q8N1E6 418 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 AQP11Q8NBQ7 271 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 PAPD5Q8NDF8 572 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 AKR7LQ8NHP1 331 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 FANK1Q8TC84 345 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 ZNRF4Q8WWF5 429 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 Q96MF0 132 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 ERMAPQ96PL5 475 aaPredicted RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 NMNAT3Q96T66 252 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 DOK1Q99704 481 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 SMR3AQ99954 134 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 NIPSNAP1Q9BPW8 284 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 ZNF416Q9BWM5 594 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 WNT5BQ9H1J7 359 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms