RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SCARB2Q14108 478 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 ARMCX4Q5H9R4 360 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 ARMC8Q8IUR7 673 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 GTF3AQ92664 365 aaKnown RBP22.7■■□□□ 1.22
CHFR-218ENST00000540963 DIRC2Q96SL1 478 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 WFDC6Q9BQY6 131 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 LEF1Q9UJU2 399 aaPredicted RBP22.7■■□□□ 1.22
CHFR-218ENST00000540963 ZNF229Q9UJW7 825 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 CORO2BQ9UQ03 480 aa22.7■■□□□ 1.22
CHFR-218ENST00000540963 DNAJC9-AS1A6NH13 148 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 CLDN34H7C241 214 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 PAGE3Q5JUK9 113 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 BLOC1S3Q6QNY0 202 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 DEFB108BQ8NET1 73 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 MCHR2Q969V1 340 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 ATP6V1G3Q96LB4 118 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 SEPHS2Q99611 448 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 MCHR1Q99705 422 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 SLC19A3Q9BZV2 496 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 SLITRK2Q9H156 845 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 UNKLQ9H9P5 680 aaKnown RBP22.69■■□□□ 1.22
CHFR-218ENST00000540963 PURGQ9UJV8 347 aaKnown RBP22.69■■□□□ 1.22
CHFR-218ENST00000540963 ZDHHC8Q9ULC8 765 aa22.69■■□□□ 1.22
CHFR-218ENST00000540963 ISPDA4D126 451 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 H3BSA7 217 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 RNASE1P07998 156 aaKnown RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 GPX2P18283 190 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 ZNF133P52736 654 aaPredicted RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 HSF2Q03933 536 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 GLO1Q04760 184 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 MELKQ14680 651 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 OCLNQ16625 522 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 MBNL2Q5VZF2 373 aaKnown RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 HIPK4Q8NE63 616 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 MARS2Q96GW9 593 aaKnown RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 MRPL13Q9BYD1 178 aaKnown RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 KCNN2Q9H2S1 579 aa22.68■■□□□ 1.22
CHFR-218ENST00000540963 EIF3KQ9UBQ5 218 aaKnown RBP22.68■■□□□ 1.22
CHFR-218ENST00000540963 TRBV5-3A0A0A0MS03 114 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 SPRY3O43610 288 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 TGDSO95455 350 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 CH25HO95992 272 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 HIST1H2ABP04908 130 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 CD55P08174 381 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 ASAH2BP0C7U1 165 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 STOMP27105 288 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 CLRN1P58418 232 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 ZMAT1Q5H9K5 638 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 TTC33Q6PID6 262 aaPredicted RBP22.67■■□□□ 1.22
CHFR-218ENST00000540963 HIST3H2AQ7L7L0 130 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 HDDC2Q7Z4H3 204 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 HIST1H2ACQ93077 130 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 SLC25A28Q96A46 364 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 IKZF5Q9H5V7 419 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 UBAP1Q9NZ09 502 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 AUP1Q9Y679 476 aa22.67■■□□□ 1.22
CHFR-218ENST00000540963 IGHMP01871 453 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 ZFP36P26651 326 aaKnown RBP22.66■■□□□ 1.22
CHFR-218ENST00000540963 PABPC1L2AQ5JQF8 200 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 C10orf128Q5T292 105 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 IPCEF1Q8WWN9 437 aaPredicted RBP22.66■■□□□ 1.22
CHFR-218ENST00000540963 MPP4Q96JB8 637 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 POM121L2Q96KW2 1035 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 C1orf147Q96MC9 270 aaPredicted RBP22.66■■□□□ 1.22
CHFR-218ENST00000540963 ARHGDIGQ99819 225 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 CCDC28BQ9BUN5 200 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 SIAEQ9HAT2 523 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 VAPAQ9P0L0 249 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 ZNF69Q9UC07 566 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 NPTNQ9Y639 398 aa22.66■■□□□ 1.22
CHFR-218ENST00000540963 VIMP08670 466 aaKnown RBP22.65■■□□□ 1.22
CHFR-218ENST00000540963 ZNF12P17014 697 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 STX1BP61266 288 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 MRPS34P82930 218 aaKnown RBP22.65■■□□□ 1.22
CHFR-218ENST00000540963 ZNF154Q13106 437 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 BAMBIQ13145 260 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 THEM4Q5T1C6 240 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 ZNF101Q8IZC7 436 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 SPICQ8N5J4 248 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 NOXO1Q8NFA2 376 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 KLF14Q8TD94 323 aaPredicted RBP22.65■■□□□ 1.22
CHFR-218ENST00000540963 ZNF347Q96SE7 839 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 ZNF426Q9BUY5 554 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 STX18Q9P2W9 335 aaKnown RBP22.65■■□□□ 1.22
CHFR-218ENST00000540963 KLHL21Q9UJP4 597 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 ANGPT4Q9Y264 503 aa22.65■■□□□ 1.22
CHFR-218ENST00000540963 A0A0G2JK05 382 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 ZSCAN5BA6NJL1 495 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 EVPLLA8MZ36 301 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 ICMTO60725 284 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 IGHV2-70P01814 119 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 CCNOP22674 350 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 AQP1P29972 269 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 PCBP3P57721 371 aaKnown RBP22.64■■□□□ 1.21
CHFR-218ENST00000540963 TMEM155Q4W5P6 130 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 KLF17Q5JT82 389 aaPredicted RBP22.64■■□□□ 1.21
CHFR-218ENST00000540963 ENTPD8Q5MY95 495 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 LRRC18Q8N456 261 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 LRRC8CQ8TDW0 803 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 MRI1Q9BV20 369 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms