RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 LIMS4P0CW20 117 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 TFPIP10646 304 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 HIST1H1CP16403 213 aaKnown RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 ZNF182P17025 639 aaPredicted RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 SLC2A5P22732 501 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 GADD45AP24522 165 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 CHRNB4P30926 498 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 AQP2P41181 271 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 RPS5P46782 204 aaKnown RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 CYB561P49447 251 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ETV1P50549 477 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 EFNA3P52797 238 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 FXYD6P3P58550 94 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ERVK-25P63136 954 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 CSNK2A1P68400 391 aaPredicted RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 DEFA6Q01524 100 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ZNF45Q02386 682 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 RPL18Q07020 188 aaKnown RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 PDSS1Q5T2R2 415 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ABHD17BQ5VST6 288 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 MZT2AQ6P582 158 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 LYPD8Q6UX82 237 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 THSD4Q6ZMP0 1018 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 SHFQ7M4L6 423 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 SLC16A9Q7RTY1 509 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 PXKQ7Z7A4 578 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 MEX3DQ86XN8 651 aaKnown RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 GTPBP8Q8N3Z3 284 aaPredicted RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 FADS6Q8N9I5 356 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 NPEPL1Q8NDH3 523 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ATP6V1C2Q8NEY4 427 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 OR1J4Q8NGS1 313 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 OR4K13Q8NH42 304 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 MCFD2Q8NI22 146 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 DYNC2LI1Q8TCX1 351 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 SNX33Q8WV41 574 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ASB5Q8WWX0 329 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 SMPDL3BQ92485 455 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 HAS2Q92819 552 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 PTP4A1Q93096 173 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 TAAR8Q969N4 342 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 C8orf44Q96CB5 159 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 KTI12Q96EK9 354 aaPredicted RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 C1GALT1C1Q96EU7 318 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 KLHL15Q96M94 604 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 OPALINQ96PE5 141 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 OR5M11Q96RB7 305 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 PIGQQ9BRB3 760 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 CHCHD6Q9BRQ6 235 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 RHNO1Q9BSD3 238 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 ALG8Q9BVK2 526 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 NMNAT2Q9BZQ4 307 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 NUAK2Q9H093 628 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 CDCP1Q9H5V8 836 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ZNF160Q9HCG1 818 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 EXOSC4Q9NPD3 245 aaKnown RBP7.46□□□□□ -1.22
CHD4-208ENST00000540960 FANCFQ9NPI8 374 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 KCNG2Q9UJ96 466 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 ADAM30Q9UKF2 790 aa7.46□□□□□ -1.22
CHD4-208ENST00000540960 A0A1W2PNV4 684 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 A0A1W2PPR1 153 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TMEM72A0PK05 275 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 PLPP3O14495 311 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SNPHO15079 494 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 OIP5O43482 229 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 PRKNO60260 465 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 GATBO75879 557 aaKnown RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 ARL6IP5O75915 188 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 WDPCPO95876 746 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 ZNF12P17014 697 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SPI1P17947 270 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 GRPRP30550 384 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SOX3P41225 446 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 GUCA1AP43080 201 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 KIR2DL3P43628 341 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TGM4P49221 684 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 VBP1P61758 197 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 GLO1Q04760 184 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 EGR4Q05215 589 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 EGR3Q06889 387 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 PUDPQ08623 228 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 FHL1Q13642 323 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SPCS2Q15005 226 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 ZNF239Q16600 458 aaKnown RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 PLPPR5Q32ZL2 321 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 KRTCAP3Q53RY4 240 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TIGD3Q6B0B8 471 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 RPL22L1Q6P5R6 122 aaKnown RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 LEG1Q6P5S2 330 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 C16orf87Q6PH81 154 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 KCTD18Q6PI47 426 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 CD200R1LQ6Q8B3 271 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TRILQ7L0X0 811 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 FAM122BQ7Z309 247 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TPRA1Q86W33 373 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SLC35F2Q8IXU6 374 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 LRRC75AQ8NAA5 344 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 MINDY2Q8NBR6 621 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 MAPK1IP1LQ8NDC0 245 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms