RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 AVPI1Q5T686 147 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 HPS1Q92902 700 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF346Q9UL40 294 aaKnown RBP12.37□□□□□ -0.43
MSRB3-209ENST00000540804 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 LOC100509620A0A075B734 347 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 TRAV27A0A087WT01 109 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 IQCMA0A1B0GVH7 501 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ELOVL7A1L3X0 281 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 H7C1C5 153 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 FFAR1O14842 300 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 SCG5P05408 212 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 SAGP10523 405 aaPredicted RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF250P15622 560 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ACHEP22303 614 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 MPV17P39210 176 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 WNT5AP41221 380 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 KLF3P57682 345 aaPredicted RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 LCN6P62502 163 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ERVK-25P63136 954 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 SELENOWP63302 87 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 MRPS34P82930 218 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 HSF2Q03933 536 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 FHL1Q13642 323 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 MAPRE2Q15555 327 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 TSTQ16762 297 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 TBPL2Q6SJ96 375 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 OR51A7Q8NH64 312 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 PRRC1Q96M27 445 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 POLR2J2Q9GZM3 115 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 RACGAP1Q9H0H5 632 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 POLR2J3Q9H1A7 115 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 TXNIPQ9H3M7 391 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 SIAEQ9HAT2 523 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 HINT3Q9NQE9 182 aaKnown RBP12.36□□□□□ -0.43
MSRB3-209ENST00000540804 MAN2C1Q9NTJ4 1040 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 GID8Q9NWU2 228 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
MSRB3-209ENST00000540804 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 SNAP29O95721 258 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 NPPAP01160 153 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 IFNA14P01570 189 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 APLNRP35414 380 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 SRP14P37108 136 aaKnown RBP12.35□□□□□ -0.43
MSRB3-209ENST00000540804 CTXN1P60606 82 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 LMO4P61968 165 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 PSG4Q00888 419 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 MVKQ03426 396 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 PLP2Q04941 152 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 LIPEQ05469 1076 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 ST3GAL3Q11203 375 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 OTPQ5XKR4 325 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF771Q7L3S4 317 aaPredicted RBP12.35□□□□□ -0.43
MSRB3-209ENST00000540804 NRMQ8IXM6 262 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 SLC15A3Q8IY34 581 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 OR13C2Q8NGS9 318 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF519Q8TB69 540 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 C11orf40Q8WZ69 217 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 WNT5BQ9H1J7 359 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 CCNB1IP1Q9NPC3 277 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 HIF3AQ9Y2N7 669 aa12.35□□□□□ -0.43
MSRB3-209ENST00000540804 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 CENPBD1B2RD01 187 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF682O95780 498 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 IGF2P01344 180 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 GAAP10253 952 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 THRBP10828 461 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF26P17031 533 aaPredicted RBP12.34□□□□□ -0.43
MSRB3-209ENST00000540804 STOMP27105 288 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 LAP3P28838 519 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 THBS2P35442 1172 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 RAD52P43351 418 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 DVL1P1P54792 670 aaPredicted RBP12.34□□□□□ -0.43
MSRB3-209ENST00000540804 RPL27P61353 136 aaKnown RBP12.34□□□□□ -0.43
MSRB3-209ENST00000540804 NRN1LQ496H8 165 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 SPRNQ5BIV9 151 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 THEM4Q5T1C6 240 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 RFPL4BQ6ZWI9 263 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
MSRB3-209ENST00000540804 OR1J2Q8NGS2 313 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 C1orf198Q9H425 327 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
MSRB3-209ENST00000540804 A0A087WUU8 490 aa12.33□□□□□ -0.44
MSRB3-209ENST00000540804 A0A1W2PPL8 197 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms