RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 GPR171O14626 319 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 EEF1E1O43324 174 aaKnown RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 SRSF10O75494 262 aaKnown RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 CALCBP10092 127 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 CCKBRP32239 447 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 INPP1P49441 399 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 OR7A5Q15622 319 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 FAM69BQ5VUD6 431 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 TMEM81Q6P7N7 255 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 CMTM4Q8IZR5 234 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 FADS6Q8N9I5 356 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ADPRHL1Q8NDY3 354 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 OR2M3Q8NG83 312 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ZNF700Q9H0M5 742 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ABCG5Q9H222 651 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 DMDP11532 3685 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 IGHV1-45A0A0A0MS14 117 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 MEP1BQ16820 701 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
RTN3-210ENST00000540798 IMMP1LQ96LU5 166 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 COMMD4Q9H0A8 199 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 KLF7O75840 302 aaPredicted RBP12.35□□□□□ -0.43
RTN3-210ENST00000540798 ZNF41P51814 821 aaPredicted RBP12.35□□□□□ -0.43
RTN3-210ENST00000540798 TBRG1Q3YBR2 411 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 HES5Q5TA89 166 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 OR10AC1Q8NH08 325 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 NEK6Q9HC98 313 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 B3GALT5Q9Y2C3 310 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 CHCHD2Q9Y6H1 151 aaPredicted RBP12.35□□□□□ -0.43
RTN3-210ENST00000540798 SCO1O75880 301 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 ADRB1P08588 477 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 BTG1P62324 171 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 GLO1Q04760 184 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 TRIM61Q5EBN2 209 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 STPG1Q5TH74 334 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 LRRN1Q6UXK5 716 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 ZNF671Q8TAW3 534 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 THRSPQ92748 146 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 COA3Q9Y2R0 106 aaPredicted RBP12.35□□□□□ -0.43
RTN3-210ENST00000540798 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
RTN3-210ENST00000540798 HLA-DQA2P01906 255 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 COX6A1P12074 109 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 IFNGR1P15260 489 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 MNDAP41218 407 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 P2RY4P51582 365 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SCAND1P57086 179 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 ADAM8P78325 824 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 DGCR2P98153 550 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 HSF1Q00613 529 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 KDM8Q8N371 416 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 OR51A4Q8NGJ6 313 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 FOXN4Q96NZ1 517 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 ABHD6Q9BV23 337 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SLITRK2Q9H156 845 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 METTL7AQ9H8H3 244 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 LIN7BQ9HAP6 207 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 TCF7L1Q9HCS4 588 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 OR5V1Q9UGF6 321 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 A0A1W2PQ72 361 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 WNT11O96014 354 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 PNPP00491 289 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 CCL4P13236 92 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SNTA1Q13424 505 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
RTN3-210ENST00000540798 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 ZNF676Q8N7Q3 588 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 WDSUB1Q8N9V3 476 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 SMAD5Q99717 465 aaKnown RBP12.34□□□□□ -0.43
RTN3-210ENST00000540798 PISDQ9UG56 409 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 NUFIP1Q9UHK0 495 aaKnown RBP12.34□□□□□ -0.43
RTN3-210ENST00000540798 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
RTN3-210ENST00000540798 TRAV8-7A0A075B6U6 113 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 NPIPA5E9PKD4 350 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 AQP8O94778 261 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 SPARCP09486 303 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 TLE3Q04726 772 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
RTN3-210ENST00000540798 ASB18Q6ZVZ8 466 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 CATSPERDQ86XM0 798 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
RTN3-210ENST00000540798 GPN3Q9UHW5 284 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms