RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 TUBA1AQ71U36 451 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 GLB1L2Q8IW92 636 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 OR6V1Q8N148 313 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 LRRC18Q8N456 261 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 CBR4Q8N4T8 237 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 SLC37A3Q8NCC5 494 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 NANOS1Q8WY41 292 aaKnown RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 EME1Q96AY2 570 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 PLPPR2Q96GM1 343 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 TSSK2Q96PF2 358 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 DDOQ99489 341 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 RPRD1BQ9NQG5 326 aaKnown RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 TMEFF2Q9UIK5 374 aaPredicted RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 COA3Q9Y2R0 106 aaPredicted RBP13.54□□□□□ -0.24
DDB1-218ENST00000540784 ORC6Q9Y5N6 252 aa13.54□□□□□ -0.24
DDB1-218ENST00000540784 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.53□□□□□ -0.24
DDB1-218ENST00000540784 FAM221AA4D161 298 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 DEFB108AA8MXU0 73 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 M0R1B8 84 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 UBL3O95164 117 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 CBR1P16152 277 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 LAP3P28838 519 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 ALDH3A2P51648 485 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 NR1H2P55055 460 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 RAB1AP62820 205 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 SLC16A14Q7RTX9 510 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 FAM169BQ8N8A8 192 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 CYB561A3Q8NBI2 242 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 HTRA1Q92743 480 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 RNF121Q9H920 327 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 SLC25A19Q9HC21 320 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 RASSF1Q9NS23 344 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 B3GNT2Q9NY97 397 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
DDB1-218ENST00000540784 H0YHG0 523 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 EI24O14681 340 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 HRGP04196 525 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 ALPLP05186 524 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 CD3EP07766 207 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 PATE4P0C8F1 98 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 ZNF3P17036 446 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 MSR1P21757 451 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 PTAFRP25105 342 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 ARR3P36575 388 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 NPRL3Q12980 569 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 CRMP1Q14194 572 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 GSG1Q2KHT4 349 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 SLC36A2Q495M3 483 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 TMEM53Q6P2H8 277 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 SEZ6L2Q6UXD5 910 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 FOXL2NBQ6ZUU3 175 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 ZBTB46Q86UZ6 589 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 MDP1Q86V88 176 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 TMEM200AQ86VY9 491 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 OR2T4Q8NH00 348 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 NABP1Q96AH0 204 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 OTULINQ96BN8 352 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 FOXN4Q96NZ1 517 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 FN3KQ9H479 309 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 RIBC2Q9H4K1 309 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 TVP23BQ9NYZ1 205 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 NPAP1Q9NZP6 1156 aa13.52□□□□□ -0.25
DDB1-218ENST00000540784 HECTD1Q9ULT8 2610 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 PTPN13Q12923 2485 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 IGLV1-36A0A0B4J1U3 117 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 FAM171A2A8MVW0 826 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 DCTN6O00399 190 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 SURF4O15260 269 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 SIAH2O43255 324 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 MPZL1O95297 269 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 PRF1P14222 555 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
DDB1-218ENST00000540784 CD40P25942 277 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
DDB1-218ENST00000540784 SLC25A1P53007 311 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 RAD23AP54725 363 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 SNAPC1Q16533 368 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 C3orf36Q3SXR2 165 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 FGFBP3Q8TAT2 258 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 SLC29A1Q99808 456 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 CLEC4MQ9H2X3 399 aaPredicted RBP13.51□□□□□ -0.25
DDB1-218ENST00000540784 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 POLE4Q9NR33 117 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 ZNF224Q9NZL3 707 aa13.51□□□□□ -0.25
DDB1-218ENST00000540784 CRNNQ9UBG3 495 aaPredicted RBP13.51□□□□□ -0.25
DDB1-218ENST00000540784 ZNF503-AS2A6NEH8 195 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms