RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 DHHO43323 396 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TLX2O43763 284 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ENTPD6O75354 484 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 GLCEO94923 617 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 RENP00797 406 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TFP02787 698 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 CCDC159P0C7I6 412 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PRR23D2P0DMB1 279 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PIPP12273 146 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PSMB1P20618 241 aaKnown RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 AGAP20933 346 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 CRABP1P29762 137 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 CENPAP49450 140 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 HIST1H3AP68431 136 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 SIRPAP78324 504 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TFF3Q07654 80 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PMPCAQ10713 525 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ETFDHQ16134 617 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 SMN1Q16637 294 aaKnown RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TEX30Q5JUR7 227 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 HIST2H3PS2Q5TEC6 136 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 UGT2A3Q6UWM9 527 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 SEZ6L2Q6UXD5 910 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 HIST2H3AQ71DI3 136 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 JAZF1Q86VZ6 243 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 GPR137CQ8N3F9 429 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 SYT14Q8NB59 555 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ACBD4Q8NC06 268 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TEX12Q9BXU0 123 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ULBP2Q9BZM5 246 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 ADGRL4Q9HBW9 690 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 POLE4Q9NR33 117 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 TMEM38BQ9NVV0 291 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 DNAJC27Q9NZQ0 273 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 AASSQ9UDR5 926 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 MOKQ9UQ07 419 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 COMMD3-BMI1R4GMX3 469 aa9.27□□□□□ -0.93
VPS33A-204ENST00000540669 PRR14LQ5THK1 2151 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 SLC22A31A6NKX4 558 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF99A8MXY4 864 aaPredicted RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 SLC1A7O00341 560 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 KHDRBS3O75525 346 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 IGHA1P01876 353 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 SCG5P05408 212 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 GYPBP06028 91 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 HTR1AP08908 422 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ADRA2AP08913 450 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 QDPRP09417 244 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 DBTP11182 482 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 IGHV1-2P23083 117 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 MPGP29372 298 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 GSTT1P30711 240 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 CHRNB4P30926 498 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 BLVRAP53004 296 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 CLRN1P58418 232 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 SLC35A2P78381 396 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 IL5RAQ01344 420 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ROR2Q01974 943 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ENDOGQ14249 297 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 P2RY6Q15077 328 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 CDSNQ15517 529 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 SLC25A35Q3KQZ1 300 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 C6orf141Q5SZD1 244 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 C1QTNF12Q5T7M4 302 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 DNM1P34Q6PK57 102 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 LYPD4Q6UWN0 246 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 MEPCEQ7L2J0 689 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 GLB1L2Q8IW92 636 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF433Q8N7K0 673 aaPredicted RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 RND1Q92730 232 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 LRRC46Q96FV0 321 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 TEAD3Q99594 435 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 RHNO1Q9BSD3 238 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 Q9H521 79 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 DUSP21Q9H596 190 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 CRLF2Q9HC73 371 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 WARS2Q9UGM6 360 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 KCNG2Q9UJ96 466 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 ERRFI1Q9UJM3 462 aaPredicted RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 PROCRQ9UNN8 238 aa9.26□□□□□ -0.93
VPS33A-204ENST00000540669 EXOGQ9Y2C4 368 aaKnown RBP9.26□□□□□ -0.93
VPS33A-204ENST00000540669 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 TRIM64CA6NLI5 447 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF587BE7ETH6 402 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 M0R3G1 203 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 DVL2O14641 736 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 SLC16A7O60669 478 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 MMP7P09237 267 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 CRHBPP24387 322 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 PYCR1P32322 319 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 CDH11P55287 796 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 LSM6P62312 80 aaKnown RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 HSF2Q03933 536 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms