RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 K7EQS6 105 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CD22P20273 847 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 S1PR1P21453 382 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 WASP42768 502 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 LPAR6P43657 344 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TAS2R20P59543 309 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 HIST2H3PS2Q5TEC6 136 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 DMKNQ6E0U4 476 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TNFAIP8L2Q6P589 184 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 OVCH1Q7RTY7 1134 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 EDAQ92838 391 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 GALNT14Q96FL9 552 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 C4orf36Q96KX1 117 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ATG5Q9H1Y0 275 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CYTL1Q9NRR1 136 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 UBQLN4Q9NRR5 601 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 SEMA4GQ9NTN9 838 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 THAP10Q9P2Z0 257 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 PRODH2Q9UF12 536 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 OR14J1Q9UGF5 321 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 KCNE5Q9UJ90 142 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 KIF26AQ9ULI4 1882 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF724A8MTY0 619 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 GPR37L1O60883 481 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 LEFTY1O75610 366 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ARL6IP5O75915 188 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TXNDC12O95881 172 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CTSLP07711 333 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CHRM4P08173 479 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 AQP2P41181 271 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 SEC13P55735 322 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TAS2R43P59537 309 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 MC1RQ01726 317 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC9A5Q14940 896 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 HNRNPA1L2Q32P51 320 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 POM121L1PQ3SYA9 428 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TAF8Q7Z7C8 310 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF610Q8N9Z0 462 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CPEB3Q8NE35 698 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 OR7G2Q8NG99 324 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 CCDC107Q8WV48 283 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 TM4SF18Q96CE8 201 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 YPEL4Q96NS1 127 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 GAL3ST4Q96RP7 486 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 MFRPQ9BY79 579 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF350Q9GZX5 532 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
CTNNA1-243ENST00000540387 ATG2BQ96BY7 2078 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 A0A087WUU8 490 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC5A10A0PJK1 596 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 IFITM5A6NNB3 132 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 IL33O95760 270 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 QDPRP09417 244 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TBC1D3HP0C7X1 549 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF7P17097 686 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 FGF7P21781 194 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 HSD3B2P26439 372 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SERPINA4P29622 427 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 MAPK8P45983 427 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TDGF1P3P51864 188 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 OR12D2P58182 307 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC10A1Q14973 349 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 ISXQ2M1V0 245 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 C9orf64Q5T6V5 341 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TBC1D3GQ6DHY5 549 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 MRM1Q6IN84 353 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 PWWP2BQ6NUJ5 590 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 FRRS1Q6ZNA5 592 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 RABEPKQ7Z6M1 372 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TMED4Q7Z7H5 227 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SERPINA9Q86WD7 417 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 OR4K14Q8NGD5 310 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 PHYHIPQ92561 330 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 PPP1R16AQ96I34 528 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 FAM46AQ96IP4 442 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 GFI1Q99684 422 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 ACTRT3Q9BYD9 372 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 MED20Q9H944 212 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SLC23A2Q9UGH3 650 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 IL17BQ9UHF5 180 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 FBXO4Q9UKT5 387 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 GAB2Q9UQC2 676 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 FLVCR1Q9Y5Y0 555 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 GXYLT2A0PJZ3 443 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SHISA7A6NL88 538 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 H7C417 338 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 DCTN6O00399 190 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 ZNF208O43345 1280 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 XRCC3O43542 346 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
CTNNA1-243ENST00000540387 SOCS5O75159 536 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms