RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 QDPRP09417 244 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 CDC42P60953 191 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 LCN6P62502 163 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 FAPQ12884 760 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 HIST3H3Q16695 136 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 TTC23Q5W5X9 447 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 WDFY1Q8IWB7 410 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 RELL2Q8NC24 303 aaPredicted RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 SDR9C7Q8NEX9 313 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 HRASLS5Q96KN8 279 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 KCNJ16Q9NPI9 418 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 FAM118AQ9NWS6 357 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 VSX1Q9NZR4 365 aaPredicted RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 MALT1Q9UDY8 824 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 MYO18BQ8IUG5 2567 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 LOC100130705A0A1B0GUX0 176 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 SLC22A23A1A5C7 686 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 FAM172BPA6NC97 362 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 FAM90A27PA6NNH2 459 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 DLGAP1O14490 977 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 PAICSP22234 425 aaKnown RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 ENTPD1P49961 510 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 ASCL1P50553 236 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 B2MP61769 119 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 CDONQ4KMG0 1287 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 C12orf73Q69YU5 71 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 DNM1P34Q6PK57 102 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 SLC37A3Q8NCC5 494 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 NPEPL1Q8NDH3 523 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 ZNF420Q8TAQ5 688 aaPredicted RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 CYGBQ8WWM9 190 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
DDB1-216ENST00000539739 MCHR2Q969V1 340 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 CEP19Q96LK0 163 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 SYT4Q9H2B2 425 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 IMPAD1Q9NX62 359 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 JKAMPQ9P055 326 aa13.61□□□□□ -0.23
DDB1-216ENST00000539739 NCOA6Q14686 2063 aaPredicted RBP13.6□□□□□ -0.23
DDB1-216ENST00000539739 RPL36A-HNRNPH2H7BZ11 118 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 SLC16A6O15403 523 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 ALX3O95076 343 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 SLC2A10O95528 541 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 PCSK6P29122 969 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 MPGP29372 298 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 CRABP1P29762 137 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 GGT2P36268 569 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 TGFBR3Q03167 851 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 P2RY6Q15077 328 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 ZNF474Q6S9Z5 364 aaPredicted RBP13.6□□□□□ -0.23
DDB1-216ENST00000539739 LINC00299Q6ZSB3 139 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 RBM24Q9BX46 236 aaKnown RBP13.6□□□□□ -0.23
DDB1-216ENST00000539739 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 ELOVL5Q9NYP7 299 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 TAS2R16Q9NYV7 291 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 NDRG4Q9ULP0 352 aaKnown RBP13.6□□□□□ -0.23
DDB1-216ENST00000539739 ERGIC3Q9Y282 383 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 FREM1Q5H8C1 2179 aa13.6□□□□□ -0.23
DDB1-216ENST00000539739 PRR23D1E9PI22 279 aaPredicted RBP13.59□□□□□ -0.23
DDB1-216ENST00000539739 DHHO43323 396 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 SLC16A7O60669 478 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 TSPAN9O75954 239 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 CLDN14O95500 239 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 PRR23D2P0DMB1 279 aaPredicted RBP13.59□□□□□ -0.23
DDB1-216ENST00000539739 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
DDB1-216ENST00000539739 GUCA1AP43080 201 aaPredicted RBP13.59□□□□□ -0.23
DDB1-216ENST00000539739 ZNF84P51523 738 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 AQP4P55087 323 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 KEAP1Q14145 624 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 CRMP1Q14194 572 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 STK11Q15831 433 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 CEACAM16Q2WEN9 425 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 PHYHD1Q5SRE7 291 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 GABRG1Q8N1C3 465 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 DEPDC4Q8N2C3 294 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 CYB561A3Q8NBI2 242 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 OTULINQ96BN8 352 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 PITX2Q99697 317 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 ADI1Q9BV57 179 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 FN3KQ9H479 309 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 RERGLQ9H628 205 aa13.59□□□□□ -0.23
DDB1-216ENST00000539739 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
DDB1-216ENST00000539739 CIB4A0PJX0 185 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 OR6C68A6NDL8 312 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 E9PQ18 207 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 H0YAE9 185 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 TLX2O43763 284 aaPredicted RBP13.58□□□□□ -0.24
DDB1-216ENST00000539739 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
DDB1-216ENST00000539739 CAPGP40121 348 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 ZNF133P52736 654 aaPredicted RBP13.58□□□□□ -0.24
DDB1-216ENST00000539739 GNG2P59768 71 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 FMODQ06828 376 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 C10orf128Q5T292 105 aa13.58□□□□□ -0.24
DDB1-216ENST00000539739 SLC25A47Q6Q0C1 308 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms