RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 COMMD7Q86VX2 200 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ADGRG3Q86Y34 549 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 MRPL48Q96GC5 212 aaKnown RBP12.66□□□□□ -0.38
UBE3B-210ENST00000539599 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 NUDT22Q9BRQ3 303 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 VN1R1Q9GZP7 353 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 WWTR1Q9GZV5 400 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 MED29Q9NX70 200 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
UBE3B-210ENST00000539599 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 STEAP1Q9UHE8 339 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 LOC100509620A0A075B734 347 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 TMED7-TICAM2A0A0A6YYA0 188 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 A0A1W2PR77 199 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ACOT7O00154 380 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 TXNDC12O95881 172 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 GTF2F2P13984 249 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 FOXK1P85037 733 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 CLPPQ16740 277 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 FAM69AQ5T7M9 428 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 BAIAP2L2Q6UXY1 529 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF227Q86WZ6 799 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 DPYSL5Q9BPU6 564 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 MICU1Q9BPX6 476 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 TRAF4Q9BUZ4 470 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 LAT2Q9GZY6 243 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 GGT3PA6NGU5 568 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 M0R233 179 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ARPC5O15511 151 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 GUSBP08236 651 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 CALCBP10092 127 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ARRB1P49407 418 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 FBXW4P57775 412 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 SLC17A1Q14916 467 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 INPP5JQ15735 1006 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-210ENST00000539599 RAB30Q15771 203 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 GPR139Q6DWJ6 353 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF627Q7L945 461 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 MSANTD3Q96H12 275 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
UBE3B-210ENST00000539599 TMEM272A0A1B0GTI8 110 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 A0A1B0GUH1 482 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 H3BML4 177 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TSPAN2O60636 221 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TGM6O95932 706 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ANOS1P23352 680 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 AP2S1P53680 142 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 METTL11BQ5VVY1 283 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 RNF144BQ7Z419 303 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ABHD6Q9BV23 337 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 CLEC4MQ9H2X3 399 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM185BQ9H7F4 350 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 LRP12Q9Y561 859 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 NPTNQ9Y639 398 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TNRC18O15417 2968 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TRAV36DV7A0A075B6V5 113 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 GOSR2O14653 212 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 NDUFB6O95139 128 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ECDO95905 644 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 IGLV3-19P01714 112 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 GP1BBP13224 206 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF35P13682 527 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 LRFN4Q6PJG9 635 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ARSKQ6UWY0 536 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ALKAL2Q6UX46 152 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TMPRSS9Q7Z410 1059 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 MUC20Q8N307 709 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 C17orf50Q8WW18 174 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 SFXN2Q96NB2 322 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ACTR6Q9GZN1 396 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 EVA1AQ9H8M9 152 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 PHF3Q92576 2039 aaKnown RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 IGLV1-36A0A0B4J1U3 117 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM212A6NML5 194 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ALOX12BO75342 701 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 RBBP9O75884 186 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 APEHP13798 732 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms