RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SLC25A42Q86VD7 318 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 JAZF1Q86VZ6 243 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 MITD1Q8WV92 249 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 NIT2Q9NQR4 276 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 TRANK1O15050 2925 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 GPR89AB7ZAQ6 455 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 H3BSH0 61 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 OR2T1O43869 369 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 IL2RAP01589 272 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 GPR89BP0CG08 455 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 PTAFRP25105 342 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 PBX2P40425 430 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 LBX1P52954 281 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 RUNX2Q13950 521 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 OR7A5Q15622 319 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 ODF4Q2M2E3 257 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 GFOD2Q3B7J2 385 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 FAM166AQ6J272 317 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SPRED2Q7Z698 418 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 FOXRED1Q96CU9 486 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 TSSK2Q96PF2 358 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 PHB2Q99623 299 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 ULBP3Q9BZM4 244 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SEMA6CQ9H3T2 930 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 DHCR7Q9UBM7 475 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 LAMP5Q9UJQ1 280 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 KCNK6Q9Y257 313 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 VSIG4Q9Y279 399 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 TTLL8A6PVC2 850 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 DCNP07585 359 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 FBXO45P0C2W1 286 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 RPS15AP62244 130 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SMCO1Q147U7 214 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 EXOSC7Q15024 291 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 ELOCQ15369 112 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 DEFB134Q4QY38 66 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 DRAM2Q6UX65 266 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF627Q7L945 461 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 PAQR4Q8N4S7 273 aaPredicted RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 EXD3Q8N9H8 876 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 TSEN15Q8WW01 171 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 ARL5BQ96KC2 179 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC6A7Q99884 636 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 FARSAQ9Y285 508 aaKnown RBP16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC22A7Q9Y694 548 aa16.83■□□□□ 0.28
SFSWAP-207ENST00000538548 SCN2AQ99250 2005 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 SSX5O60225 188 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC35G6P0C7Q6 338 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 PPP1R1AQ13522 171 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 LILRA6Q6PI73 481 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 TMEM200AQ86VY9 491 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 PRSS35Q8N3Z0 413 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 NT5CQ8TCD5 201 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 TMED6Q8WW62 240 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 RSPRY1Q96DX4 576 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 TCEAL7Q9BRU2 100 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 EGLN1Q9GZT9 426 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 OR51M1Q9H341 326 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ELOA3DA6NLF2 546 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF705EA8MWA4 302 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 EIF1AYO14602 144 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 B3GALT2O43825 422 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 FARS2O95363 451 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 FAM157CP0CG43 387 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 LIPCP11150 499 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 P2RY2P41231 377 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 HAAOP46952 286 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 EIF1AXP47813 144 aaKnown RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 DMWDQ09019 674 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 DHCR24Q15392 516 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ELOA3BQ3SY89 546 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF550Q7Z398 422 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 KREMEN2Q8NCW0 462 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ELOA3Q8NG57 546 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 ZCCHC10Q8TBK6 192 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 PRRT1Q99946 306 aa16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 SEBOXQ9HB31 216 aaPredicted RBP16.82■□□□□ 0.28
SFSWAP-207ENST00000538548 TRPM6Q9BX84 2022 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 A0A087WUJ7 227 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 CPED1A4D0V7 1026 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C4orf47A7E2U8 309 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C1orf196B1AJZ1 125 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 NARSO43776 548 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 DOK2O60496 412 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 ICOSLGO75144 302 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 MOSPD3O75425 235 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 S100A6P06703 90 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 CD14P08571 375 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF28P17035 718 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 S100PP25815 95 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 PSMB6P28072 239 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 PPICP45877 212 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 EGR3Q06889 387 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 MEF2DQ14814 521 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 EIF2S3LQ2VIR3 472 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C12orf40Q86WS4 652 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C15orf54Q8N8G6 183 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms