RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 GLT8D1Q68CQ7 371 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 FAM199XQ6PEV8 388 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 TSSK4Q6SA08 328 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ZNF704Q6ZNC4 412 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 ASB18Q6ZVZ8 466 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 SLC35D2Q76EJ3 337 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 BTN2A1Q7KYR7 527 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 FGD2Q7Z6J4 655 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 LRRTM1Q86UE6 522 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 NOXA1Q86UR1 476 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 TMPRSS12Q86WS5 348 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 PLCZ1Q86YW0 608 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 GLB1L2Q8IW92 636 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 CMTM4Q8IZR5 234 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 NKAIN3Q8N8D7 197 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 SLC38A9Q8NBW4 561 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 SLC26A10Q8NG04 563 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 OR56B4Q8NH76 319 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 GRPEL2Q8TAA5 225 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 M1APQ8TC57 530 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ELP5Q8TE02 316 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 CAPSLQ8WWF8 208 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 FCAMRQ8WWV6 532 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 MCHR2Q969V1 340 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 RNF166Q96A37 237 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 ZNF524Q96C55 264 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 C8orf44Q96CB5 159 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ZFP3Q96NJ6 502 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 RBP7Q96R05 134 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ABHD1Q96SE0 405 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 KCNK17Q96T54 332 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 GTPBP2Q9BX10 602 aaKnown RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 OR11A1Q9GZK7 315 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ZNF700Q9H0M5 742 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 TSPAN10Q9H1Z9 355 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 SLA2Q9H6Q3 261 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 ELOVL3Q9HB03 270 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 DIABLOQ9NR28 239 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 SLCO1C1Q9NYB5 712 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 HHLA2Q9UM44 414 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 DHDHQ9UQ10 334 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 COLQQ9Y215 455 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 RPH3AQ9Y2J0 694 aaPredicted RBP5.96□□□□□ -1.46
USP28-206ENST00000538224 N6AMT1Q9Y5N5 214 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 B3GALT1Q9Y5Z6 326 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 R4GMQ9 66 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 PCNX3Q9H6A9 2034 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 SEC16AO15027 2179 aa5.96□□□□□ -1.46
USP28-206ENST00000538224 TRIOBPQ9H2D6 2365 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 A0A0A6YYH2 397 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 A0A0B4J293 547 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 LOC102725191A0A1B0GVB3 256 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 A0A1B0GVI7 797 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 A0A1W2PQ72 361 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 A6NJ64 397 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 TMEM200CA6NKL6 621 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 C4orf47A7E2U8 309 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 B4E171 279 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 MS4A18H0YCH9 400 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 PSMD9O00233 223 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SLC17A2O00624 439 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 TLX3O43711 291 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 TRIOO75962 3097 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SNAPC5O75971 98 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 OR2J2O76002 312 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SCGNO76038 276 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 IGHG1P01857 330 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 TCRBP04435 133 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 H2AFB2P0C5Z0 115 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 ZNF883P0CG24 379 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 IFNGR1P15260 489 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 TSPAN7P41732 249 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SOX2P48431 317 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CLRN1P58418 232 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 DGCR2P98153 550 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 POU3F1Q03052 451 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 SIGLEC14Q08ET2 396 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SNTB2Q13425 540 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 MADCAM1Q13477 382 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 KLF9Q13886 244 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 MELKQ14680 651 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 PCOLCEQ15113 449 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CDK10Q15131 360 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 RAB11BQ15907 218 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 BTBD16Q32M84 506 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 MS4A18Q3C1V0 323 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SLC36A2Q495M3 483 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 WDR38Q5JTN6 314 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 THEM4Q5T1C6 240 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CD276Q5ZPR3 534 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 OLFML2AQ68BL7 652 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SLC23A3Q6PIS1 610 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 KLHL24Q6TFL4 600 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 LYPD8Q6UX82 237 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 RHOUQ7L0Q8 258 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 LUZP2Q86TE4 346 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CATSPERDQ86XM0 798 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SIAH3Q8IW03 269 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 UEVLDQ8IX04 471 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 UBE2J2Q8N2K1 259 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms