RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 GLCEO94923 617 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 CFDP00746 253 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 DGCR2P98153 550 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TRA2AQ13595 282 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 ST3GAL2Q16842 350 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 CDONQ4KMG0 1287 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 MESTQ5EB52 335 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 PXDC1Q5TGL8 231 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 LIN54Q6MZP7 749 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 IDO2Q6ZQW0 420 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 SIAH3Q8IW03 269 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 OR8K3Q8NH51 312 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 ZFP3Q96NJ6 502 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 RXFP3Q9NSD7 469 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 SH3BGRL2Q9UJC5 107 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 ASCC3Q8N3C0 2202 aaKnown RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 PRR32B1ATL7 298 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 B8ZZF3 427 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 M0R296 226 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 OGG1O15527 345 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 FZD7O75084 574 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 SERPINI2O75830 405 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 SC5DO75845 299 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 TOXO94900 526 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 TPOP07202 933 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 NPR2P20594 1047 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 RBMS1P29558 406 aaKnown RBP9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF81P51508 661 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 EXOSC2Q13868 293 aaKnown RBP9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 TCEAL6Q6IPX3 200 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 GRINAQ7Z429 371 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 CEACAM19Q7Z692 300 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 MISPQ8IVT2 679 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ABHD4Q8TB40 342 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 LRRC20Q8TCA0 184 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 TCEAL3Q969E4 200 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 YIPF5Q969M3 257 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 PELI1Q96FA3 418 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 KCNN2Q9H2S1 579 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 RANBP3Q9H6Z4 567 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-210ENST00000538120 DIABLOQ9NR28 239 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 NCDNQ9UBB6 729 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 FRYLO94915 3013 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ANKUB1A6NFN9 424 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 MT-ND4P03905 459 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 HIST1H2ABP04908 130 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ANXA3P12429 323 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 SNRPBP14678 240 aaKnown RBP9.67□□□□□ -0.86
CLIP1-210ENST00000538120 NAGAP17050 411 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 M6PRP20645 277 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 PTGDSP41222 190 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 MC2RQ01718 297 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 EMC4Q5J8M3 183 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 HIST3H2AQ7L7L0 130 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 SYS1Q8N2H4 156 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ZBTB44Q8NCP5 570 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 AGBL5Q8NDL9 886 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 OR6K6Q8NGW6 343 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 HIST1H2ACQ93077 130 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 DACT3Q96B18 629 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-210ENST00000538120 SORCS2Q96PQ0 1159 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 OR11A1Q9GZK7 315 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 DPAGT1Q9H3H5 408 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 WDR54Q9H977 334 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 EMC7Q9NPA0 242 aa9.67□□□□□ -0.86
CLIP1-210ENST00000538120 RPS10-NUDT3A0A1W2PQS6 291 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 A8MVM7 634 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 H7C1C5 153 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 ZFAND5O76080 213 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 DKK1O94907 266 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 UMODP07911 640 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 TAS2R43P59537 309 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 LCN6P62502 163 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 CAMK2DQ13557 499 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 PCOLCEQ15113 449 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF684Q5T5D7 378 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 C1orf140Q5VVS0 124 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 FAM198BQ6UWH4 519 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 IZUMO1Q8IYV9 350 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 OR6V1Q8N148 313 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 TOMM5Q8N4H5 51 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 OR5L2Q8NGL0 311 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 SLC25A36Q96CQ1 311 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 CACNG6Q9BXT2 260 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MRPL15Q9P015 296 aaKnown RBP9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MED11Q9P086 117 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MYOTQ9UBF9 498 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 GRHPRQ9UBQ7 328 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 AUP1Q9Y679 476 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 PCNX3Q9H6A9 2034 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 LOC102723996A0A087X1L8 192 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 GPR171O14626 319 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 SLC25A12O75746 678 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MT-ATP6P00846 226 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 HPXP02790 462 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 CYC1P08574 325 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms