RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 BCO1Q9HAY6 547 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 PHIPQ8WWQ0 1821 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 MBLAC1A4D2B0 266 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 MYADML2A6NDP7 307 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 UTS2O95399 124 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CNIH1O95406 144 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 HEXAP06865 529 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CYBAP13498 195 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 MPPED2Q15777 294 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 FAM71CQ8NEG0 241 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 OR13F1Q8NGS4 319 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 RLN3Q8WXF3 142 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SLC35E1Q96K37 410 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 TMEM43Q9BTV4 400 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 NUDT9Q9BW91 350 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CALHM2Q9HA72 323 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF638Q14966 1978 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ZFP92A6NM28 416 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CTXN2P0C2S0 81 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 BMP1P13497 986 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 TACR1P25103 407 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 PCSK6P29122 969 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ADRA1AP35348 466 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CDONQ4KMG0 1287 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ZMAT1Q5H9K5 638 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CISD2Q8N5K1 135 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SCARB1Q8WTV0 552 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 FGGYQ96C11 551 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 EGLN1Q9GZT9 426 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 EPHX3Q9H6B9 360 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 EXOSC3Q9NQT5 275 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SLAMF8Q9P0V8 285 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SNCGO76070 127 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 SLC35E2P0CK97 266 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 RPL11P62913 178 aaKnown RBP9.8□□□□□ -0.84
CLIP1-209ENST00000537178 CD276Q5ZPR3 534 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF626Q68DY1 528 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 PKMYT1Q99640 499 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 HAPLN2Q9GZV7 340 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 HSFX1Q9UBD0 423 aa9.8□□□□□ -0.84
CLIP1-209ENST00000537178 M0QYG6 137 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 L3MBTL4Q8NA19 623 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 SLC25A43Q8WUT9 341 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 NEURL3Q96EH8 262 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OPA3Q9H6K4 179 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 KLRC4-KLRK1H3BQV0 150 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 H2AFB1P0C5Y9 115 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 HCCSP53701 268 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 FXNQ16595 210 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 Q6ZNX1 250 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 MED25Q71SY5 747 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 H2BFWTQ7Z2G1 175 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 LINC00346Q8IVM7 164 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 SUMF1Q8NBK3 374 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OR51A2Q8NGJ7 313 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OR13C8Q8NGS7 320 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 PDCD1LG2Q9BQ51 273 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 C11orf54Q9H0W9 315 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 PRSS16Q9NQE7 514 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 PDLIM7Q9NR12 457 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 FGF21Q9NSA1 209 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 FURINP09958 794 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 F2RP25116 425 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 POLR2IP36954 125 aaKnown RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 NKX2-1P43699 371 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 BTG1P62324 171 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 MAT1AQ00266 395 aaKnown RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 KCTD11Q693B1 232 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 ADAM5Q6NVV9 412 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 GLIPR1L1Q6UWM5 242 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OR6K3Q8NGY3 331 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 UBTD2Q8WUN7 234 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 BOD1Q96IK1 185 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 MS4A8Q9BY19 250 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 TGIF2Q9GZN2 237 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 NTN4Q9HB63 628 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 CSNK1G1Q9HCP0 422 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 OBP2AQ9NY56 170 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 KCND3Q9UK17 655 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 NDRG4Q9ULP0 352 aaKnown RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 EFSO43281 561 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 IGFBP1P08833 259 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 C1SP09871 688 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 SPI1P17947 270 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 FKBP2P26885 142 aaKnown RBP9.79□□□□□ -0.84
CLIP1-209ENST00000537178 TPMTP51580 245 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 PHLDA2Q53GA4 152 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 H3F3CQ6NXT2 135 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 ZFPM2Q8WW38 1151 aa9.79□□□□□ -0.84
CLIP1-209ENST00000537178 PIGTQ969N2 578 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms