RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 MCUR1Q96AQ8 359 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 KCTD14Q9BQ13 255 aaPredicted RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 FAM192AQ9GZU8 254 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 ADAP2Q9NPF8 381 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 EXD2Q9NVH0 621 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 NUP50Q9UKX7 468 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 CAB39Q9Y376 341 aaPredicted RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 YTHDF2Q9Y5A9 579 aaKnown RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 PRSS37A4D1T9 235 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 GOSR2O14653 212 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 CHST1O43916 411 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 SOX15O60248 233 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 CDH16O75309 829 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 FTH1P02794 183 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 TCN1P20061 433 aaPredicted RBP2.75□□□□□ -1.97
PRKDC-205ENST00000535375 RPS15P62841 145 aaKnown RBP2.75□□□□□ -1.97
PRKDC-205ENST00000535375 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ARHGAP19Q14CB8 494 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 TGFBIQ15582 683 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ALKBH6Q3KRA9 238 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 TMEM220Q6QAJ8 160 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 CERS6Q6ZMG9 384 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 BZW1Q7L1Q6 419 aaKnown RBP2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ASCL5Q7RTU5 278 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ARRDC1Q8N5I2 433 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF709Q8N972 641 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 FBXL13Q8NEE6 735 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 OR1S2Q8NGQ3 325 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 OR2G3Q8NGZ4 309 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ZFP90Q8TF47 636 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 PIBF1Q8WXW3 757 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 LRRC58Q96CX6 371 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 PANX1Q96RD7 426 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 DNTTIP1Q9H147 329 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ING2Q9H160 280 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 NCOR1P1Q9H4R4 102 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 CWH43Q9H720 699 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF160Q9HCG1 818 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 VANGL2Q9ULK5 521 aa2.75□□□□□ -1.97
PRKDC-205ENST00000535375 PHF3Q92576 2039 aaKnown RBP2.75□□□□□ -1.97
PRKDC-205ENST00000535375 CARMIL3Q8ND23 1372 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 NINLQ9Y2I6 1382 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 MRPS12O15235 138 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CLOCKO15516 846 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CD5LO43866 347 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 MGRN1O60291 552 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 ENTPD5O75356 428 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 ANXA8P13928 327 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CNR1P21554 472 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 RORAP35398 523 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 ATP5C1P36542 298 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 SYKP43405 635 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 GPR6P46095 362 aaPredicted RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CCNHP51946 323 aaPredicted RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 PDIA2Q13087 525 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CHRNA6Q15825 494 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 KPRPQ5T749 579 aaPredicted RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 ANXA8L1Q5VT79 327 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 TMEM135Q86UB9 458 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 PUSL1Q8N0Z8 303 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 ZADH2Q8N4Q0 377 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 CCDC148Q8NFR7 591 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 NRGNQ92686 78 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 STMN2Q93045 179 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 HSFY1Q96LI6 401 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 MTG1Q9BT17 334 aaPredicted RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 MRPL47Q9HD33 250 aaKnown RBP2.74□□□□□ -1.97
PRKDC-205ENST00000535375 INSRP06213 1382 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 USP47Q96K76 1375 aa2.74□□□□□ -1.97
PRKDC-205ENST00000535375 H0YIV9 168 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 H3BNH8 94 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 XKRYO14609 159 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 IGLV2-23P01705 113 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 ALDOBP05062 364 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 CISD3P0C7P0 127 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 RAB9AP51151 201 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 C21orf59P57076 290 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 REG3AQ06141 175 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 GUCA2BQ16661 112 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 C1orf185Q5T7R7 199 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 LCN12Q6JVE5 192 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF836Q6ZNA1 936 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 FAM86B1Q8N7N1 296 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 PHF10Q8WUB8 498 aaKnown RBP2.73□□□□□ -1.97
PRKDC-205ENST00000535375 KIFAP3Q92845 792 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 DNAJC19Q96DA6 116 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 OR51M1Q9H341 326 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 AUNIPQ9H7T9 357 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF430Q9H8G1 570 aaPredicted RBP2.73□□□□□ -1.97
PRKDC-205ENST00000535375 GPATCH2LQ9NWQ4 482 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 OPN4Q9UHM6 478 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 KIAA1257Q9ULG3 409 aa2.73□□□□□ -1.97
PRKDC-205ENST00000535375 WDR19Q8NEZ3 1342 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 IGKV1D-13A0A0B4J2D9 117 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF726A6NNF4 738 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 RAB29O14966 203 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 EIF3GO75821 320 aaKnown RBP eCLIP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 OR2J3O76001 311 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 CLPXO76031 633 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms