RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 TRIM69Q86WT6 500 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 HORMAD1Q86X24 394 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 SKA3Q8IX90 412 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 CENPLQ8N0S6 344 aaPredicted RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 RNF139Q8WU17 664 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 FAHD2AQ96GK7 314 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 CELF6Q96J87 481 aaKnown RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 KLF6Q99612 283 aaPredicted RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 MCHR1Q99705 422 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 CYP3A43Q9HB55 503 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 ACP6Q9NPH0 428 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 COX16Q9P0S2 106 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 OARD1Q9Y530 152 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 OR51B4Q9Y5P0 310 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 LRP4O75096 1905 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 F8P00451 2351 aa4.34□□□□□ -1.72
CASP4-213ENST00000534356 DOCK4Q8N1I0 1966 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 IGHV1OR15-1A0A075B7D0 117 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 IGHV7-81A0A0B4J1V7 117 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 A0A0D9SEW6 157 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SPTY2D1-AS1A0A0U1RR47 76 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 KPNA3O00505 521 aaPredicted RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 XPO1O14980 1071 aaKnown RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 AQP9O43315 295 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 IGLV1-47P01700 117 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 GP1BAP07359 652 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 KRT7P08729 469 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SYT1P21579 422 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 RBMXP38159 391 aaKnown RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 EWSR1Q01844 656 aaKnown RBP eCLIP4.33□□□□□ -1.72
CASP4-213ENST00000534356 RIPPLY1Q0D2K3 151 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 C16orf72Q14CZ0 275 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SLC5A12Q1EHB4 618 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 FAM199XQ6PEV8 388 aaPredicted RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 DNM1P46Q6ZS02 220 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 LINC00301Q8NCQ3 95 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 OR6K2Q8NGY2 324 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 AENQ8WTP8 325 aaKnown RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 PAGE5Q96GU1 130 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 RNF126Q9BV68 326 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 ZNF416Q9BWM5 594 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SLC17A9Q9BYT1 436 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 DPH5Q9H2P9 285 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 ASB8Q9H765 288 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 COQ10BQ9H8M1 238 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 POLE3Q9NRF9 147 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 SCML1Q9UN30 329 aa4.33□□□□□ -1.72
CASP4-213ENST00000534356 DIDO1Q9BTC0 2240 aaKnown RBP4.33□□□□□ -1.72
CASP4-213ENST00000534356 ZFHX3Q15911 3703 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 K7N7A8 449 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 CD160O95971 181 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 IFNB1P01574 187 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 TPSB2P20231 275 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 FUT3P21217 361 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 HNRNPA2B1P22626 353 aaKnown RBP4.32□□□□□ -1.72
CASP4-213ENST00000534356 PSMA2P25787 234 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 HTR2AP28223 471 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 AQP1P29972 269 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 MDH1P40925 334 aaKnown RBP4.32□□□□□ -1.72
CASP4-213ENST00000534356 PLK1P53350 603 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 AP3M2P53677 418 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 RAB40BQ12829 278 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 TPSAB1Q15661 275 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 CCDC14Q49A88 953 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 SULT1C3Q6IMI6 304 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 AFTPHQ6ULP2 937 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 TMEM135Q86UB9 458 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 ZNF573Q86YE8 665 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 ARHGAP18Q8N392 663 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 FADS6Q8N9I5 356 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 CCL4L1Q8NHW4 92 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 ANKRD49Q8WVL7 239 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 OR8D1Q8WZ84 308 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 TAF4BQ92750 862 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 MS4A14Q96JA4 679 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 C4orf36Q96KX1 117 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 TXN2Q99757 166 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 GPA33Q99795 319 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 SLC6A7Q99884 636 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 OR51J1Q9H342 316 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 LRRN3Q9H3W5 708 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 RDH14Q9HBH5 336 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 VANGL2Q9ULK5 521 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 GSTK1Q9Y2Q3 226 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 FADS3Q9Y5Q0 445 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 MRPS18BQ9Y676 258 aaKnown RBP4.32□□□□□ -1.72
CASP4-213ENST00000534356 NAV3Q8IVL0 2385 aa4.32□□□□□ -1.72
CASP4-213ENST00000534356 MED13LQ71F56 2210 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 SPTBP11277 2137 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 D6RAR5 112 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 PANO1I0J062 215 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 M0QYV0 167 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 IGHV3-48P01763 117 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 LIPCP11150 499 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 F8A1P23610 371 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 NTSP30990 170 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 PFN3P60673 137 aa4.31□□□□□ -1.72
CASP4-213ENST00000534356 CKAP4Q07065 602 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms