RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PROCP04070 461 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L2P0CJ85 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L5P0CJ88 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L6P0CJ89 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L7P0CJ90 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 PKNOX1P55347 436 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 PPP1CBP62140 327 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 EPS8Q12929 822 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 KIAA0040Q15053 153 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 SLC36A2Q495M3 483 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 ATG16L1Q676U5 607 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4L9Q6RFH8 374 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 Q6ZR03 302 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 CCDC121Q6ZUS5 278 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 TMEM139Q8IV31 216 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 CADM2Q8N3J6 435 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 ABHD4Q8TB40 342 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 SLC7A13Q8TCU3 470 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 STK35Q8TDR2 534 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 MRRFQ96E11 262 aaKnown RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 MTERF3Q96E29 417 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 TXNDC15Q96J42 360 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 PBKQ96KB5 322 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 PRR25Q96S07 402 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 CCT7Q99832 543 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 MRPL57Q9BQC6 102 aaKnown RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF702PQ9H963 129 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 RRAGDQ9NQL2 400 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 MAN2C1Q9NTJ4 1040 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 ERVK-18Q9QC07 812 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 A0A1B0GVI7 797 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 MEIOCA2RUB1 952 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 H3BSA7 217 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 M0R082 166 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 C6orf47O95873 294 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 GUSBP08236 651 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 HLA-DOBP13765 273 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 SDC1P18827 310 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 AHCYP23526 432 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 STOMP27105 288 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 PSMB10P40306 273 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ACAA2P42765 397 aaKnown RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 SERPINB8P50452 374 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 FOXA1P55317 472 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 HSF2Q03933 536 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 PSG7Q13046 419 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 LSM12Q3MHD2 195 aaKnown RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ZNF678Q5SXM1 525 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ATAD3BQ5T9A4 648 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 CRIP3Q6Q6R5 217 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 H1FNTQ75WM6 255 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 SLC16A14Q7RTX9 510 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 C6orf120Q7Z4R8 191 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 OR7A2PQ8NGA2 310 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 OR5AU1Q8NGC0 362 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 OR4K5Q8NGD3 323 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ZNF417Q8TAU3 575 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 XAGE5Q8WWM1 108 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 METTL2AQ96IZ6 378 aaKnown RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ZNF587Q96SQ5 575 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 PTDSS2Q9BVG9 487 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 TRIM31Q9BZY9 425 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 MRPL46Q9H2W6 279 aaKnown RBP8.58□□□□□ -1.04
CSDE1-215ENST00000533818 ZMAT4Q9H898 229 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 TMEM38BQ9NVV0 291 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 STK38LQ9Y2H1 464 aa8.58□□□□□ -1.04
CSDE1-215ENST00000533818 A0A096LPI6 279 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 TCRBV4S1A1TA0A5B7 111 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 C5orf49A4QMS7 147 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 CFLARO15519 480 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 CHST1O43916 411 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 SASH3O75995 380 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 HPRP00739 348 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 GSTA2P09210 222 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 LAMP1P11279 417 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 NCF2P19878 526 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-215ENST00000533818 ARRB2P32121 409 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 SAA4P35542 130 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 SOAT1P35610 550 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 CSNK1A1P48729 337 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 PRB3Q04118 309 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-215ENST00000533818 NAB1Q13506 487 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 CDONQ4KMG0 1287 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 WBP2NLQ6ICG8 309 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 KCTD18Q6PI47 426 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-215ENST00000533818 NHLRC1Q6VVB1 395 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 WDR88Q6ZMY6 472 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 RFPL4BQ6ZWI9 263 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 SATL1Q86VE3 508 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 IGFN1Q86VF2 1251 aa8.57□□□□□ -1.04
CSDE1-215ENST00000533818 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
CSDE1-215ENST00000533818 C1orf87Q8N0U7 546 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms