RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 IQCJQ1A5X6 159 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TMEM249Q2WGJ8 235 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ZNF699Q32M78 642 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PLPPR5Q32ZL2 321 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 GPR157Q5UAW9 335 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 MARC1Q5VT66 337 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 SP5Q6BEB4 398 aaPredicted RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 CAPN13Q6MZZ7 669 aaPredicted RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 DRAM2Q6UX65 266 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PAMR1Q6UXH9 720 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 UNQ9370/PRO34162Q6UXP9 181 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 Q6YL49 198 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ZNF620Q6ZNG0 422 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ZNF367Q7RTV3 350 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 OR2W3Q7Z3T1 314 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 SPATA19Q7Z5L4 167 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NIT1Q86X76 327 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 LINC00346Q8IVM7 164 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ZFP82Q8N141 532 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 FTMTQ8N4E7 242 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 HORMAD2Q8N7B1 307 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 EXD3Q8N9H8 876 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 STXBP6Q8NFX7 210 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 OR4C5Q8NGB2 326 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 OR13C5Q8NGS8 318 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 DUSP19Q8WTR2 217 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NPRL2Q8WTW4 380 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 CANT1Q8WVQ1 401 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 CACNG8Q8WXS5 425 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 HSD17B8Q92506 261 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ISOC2Q96AB3 205 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ULK4Q96C45 1275 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 TECTBQ96PL2 329 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 ACOX2Q99424 681 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PKMYT1Q99640 499 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 NPAS2Q99743 824 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 EGFL8Q99944 293 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RTN4RQ9BZR6 473 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 GABARAPL1Q9H0R8 117 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 C20orf85Q9H1P6 137 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 MAGEH1Q9H213 219 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 SMDT1Q9H4I9 107 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 WDR54Q9H977 334 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 CHODLQ9H9P2 273 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 PLEKHA2Q9HB19 425 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 BEX1Q9HBH7 125 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 C6orf50Q9HD87 102 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 MBNL1Q9NR56 388 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 GJB4Q9NTQ9 266 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 MRPL27Q9P0M9 148 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 MRTO4Q9UKD2 239 aaKnown RBP4.97□□□□□ -1.61
CD44-236ENST00000533222 KPTNQ9Y664 436 aa4.97□□□□□ -1.61
CD44-236ENST00000533222 RGPD2P0DJD1 1756 aa4.96□□□□□ -1.61
CD44-236ENST00000533222 LOXHD1Q8IVV2 1947 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 BAZ2AQ9UIF9 1905 aaKnown RBP4.96□□□□□ -1.62
CD44-236ENST00000533222 ZSWIM8A7E2V4 1837 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SMCO3A2RU48 225 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 LRIT2A6NDA9 550 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 C4orf47A7E2U8 309 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 A8MVM7 634 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SNRPGP15A8MWD9 76 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 E7EWF7 191 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SMLR1H3BR10 107 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 J3QR06 171 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 MFNGO00587 321 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 FFAR2O15552 330 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 ZNF264O43296 627 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 ZNF208O43345 1280 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SYT7O43581 403 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 DCXO43602 365 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 LDB2O43679 373 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SLC37A4O43826 429 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 KCNK5O95279 499 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 GLP2RO95838 553 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 CST4P01036 141 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 IRF2P14316 349 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 CMPK1P30085 196 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 AKT2P31751 481 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 CCKARP32238 428 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SDC2P34741 201 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 PTGER4P35408 488 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 GALCP54803 685 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 LOXL3P58215 753 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 MAXP61244 160 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 C2orf80Q0P641 193 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 OLIG2Q13516 323 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 HLFQ16534 295 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 TMEM255AQ5JRV8 349 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 NCMAPQ5T1S8 102 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 NCR3LG1Q68D85 454 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SERPINA13PQ6UXR4 307 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 MOB2Q70IA6 237 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 ZNF571Q7Z3V5 609 aaPredicted RBP4.96□□□□□ -1.62
CD44-236ENST00000533222 C5orf24Q7Z6I8 188 aa4.96□□□□□ -1.62
CD44-236ENST00000533222 SERPINA11Q86U17 422 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms