RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 FAM209AQ5JX71 171 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TTC33Q6PID6 262 aaPredicted RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 DPPA2Q7Z7J5 298 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 RANBP3LQ86VV4 465 aaPredicted RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 ARMC8Q8IUR7 673 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 ZNF101Q8IZC7 436 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 C10orf111Q8N326 155 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 KLHL36Q8N4N3 616 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 KIR3DL3Q8N743 410 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 ABHD4Q8TB40 342 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 KLF14Q8TD94 323 aaPredicted RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 IPCEF1Q8WWN9 437 aaPredicted RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 NSMAFQ92636 917 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 OR52B2Q96RD2 323 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TCF7L2Q9NQB0 619 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 NANSQ9NR45 359 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 ZIM2Q9NZV7 527 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 SLAMF8Q9P0V8 285 aa11.01□□□□□ -0.65
COPB1-209ENST00000533096 TESQ9UGI8 421 aaKnown RBP11.01□□□□□ -0.65
COPB1-209ENST00000533096 MFN2O95140 757 aa11□□□□□ -0.65
COPB1-209ENST00000533096 IGHG1P01857 330 aa11□□□□□ -0.65
COPB1-209ENST00000533096 F13BP05160 661 aa11□□□□□ -0.65
COPB1-209ENST00000533096 RNASE1P07998 156 aaKnown RBP11□□□□□ -0.65
COPB1-209ENST00000533096 PGA4P0DJD7 388 aa11□□□□□ -0.65
COPB1-209ENST00000533096 PGA3P0DJD8 388 aa11□□□□□ -0.65
COPB1-209ENST00000533096 SLC6A2P23975 617 aa11□□□□□ -0.65
COPB1-209ENST00000533096 WNT5AP41221 380 aa11□□□□□ -0.65
COPB1-209ENST00000533096 MTNR1AP48039 350 aa11□□□□□ -0.65
COPB1-209ENST00000533096 FADDQ13158 208 aa11□□□□□ -0.65
COPB1-209ENST00000533096 SCARB2Q14108 478 aa11□□□□□ -0.65
COPB1-209ENST00000533096 RUNDC3AQ59EK9 446 aa11□□□□□ -0.65
COPB1-209ENST00000533096 TMEM255AQ5JRV8 349 aa11□□□□□ -0.65
COPB1-209ENST00000533096 C16orf87Q6PH81 154 aa11□□□□□ -0.65
COPB1-209ENST00000533096 C17orf107Q6ZR85 190 aa11□□□□□ -0.65
COPB1-209ENST00000533096 GOLGA6L1Q8N7Z2 621 aa11□□□□□ -0.65
COPB1-209ENST00000533096 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
COPB1-209ENST00000533096 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
COPB1-209ENST00000533096 TRIM44Q96DX7 344 aaPredicted RBP11□□□□□ -0.65
COPB1-209ENST00000533096 MARS2Q96GW9 593 aaKnown RBP11□□□□□ -0.65
COPB1-209ENST00000533096 ZNF607Q96SK3 696 aa11□□□□□ -0.65
COPB1-209ENST00000533096 SDR39U1Q9NRG7 319 aaPredicted RBP11□□□□□ -0.65
COPB1-209ENST00000533096 THAP1Q9NVV9 213 aa11□□□□□ -0.65
COPB1-209ENST00000533096 SLC25A37Q9NYZ2 338 aa11□□□□□ -0.65
COPB1-209ENST00000533096 PDP1Q9P0J1 537 aaPredicted RBP11□□□□□ -0.65
COPB1-209ENST00000533096 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
COPB1-209ENST00000533096 LOC100509620A0A075B734 347 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 PPIAL4EA0A075B759 164 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 MDFIC2A0A1B0GVS7 189 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 MCIDASD6RGH6 385 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 PPIAL4DF5H284 164 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ZNF205O95201 554 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 KNG1P01042 644 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 NGFP01138 241 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 IGHMP01871 453 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 CRYBA1P05813 215 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 PPIAL4FP0DN26 164 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 IGHV4-38-2P0DP08 117 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 BMP2P12643 396 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ZNF12P17014 697 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ZNF32P17041 273 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 CD80P33681 288 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 SLC6A9P48067 706 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 PPP1CBP62140 327 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ERVK-25P63136 954 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ZNF74Q16587 644 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 MSANTD1Q6ZTZ1 278 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 RBM45Q8IUH3 476 aaKnown RBP10.99□□□□□ -0.65
COPB1-209ENST00000533096 DIRC2Q96SL1 478 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 TMEM109Q9BVC6 243 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 NANOGQ9H9S0 305 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ZMAT3Q9HA38 289 aaKnown RBP10.99□□□□□ -0.65
COPB1-209ENST00000533096 PATZ1Q9HBE1 687 aaKnown RBP10.99□□□□□ -0.65
COPB1-209ENST00000533096 CYSLTR2Q9NS75 346 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 ANGPT4Q9Y264 503 aa10.99□□□□□ -0.65
COPB1-209ENST00000533096 A0A1W2PRG6 482 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 HOXA3O43365 443 aaPredicted RBP10.98□□□□□ -0.65
COPB1-209ENST00000533096 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
COPB1-209ENST00000533096 FMO6PO60774 539 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 SLC2A10O95528 541 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 IGHV2-70P01814 119 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 OPN1SWP03999 348 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 MMP7P09237 267 aaPredicted RBP10.98□□□□□ -0.65
COPB1-209ENST00000533096 PSG4Q00888 419 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 DUSP7Q16829 419 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 ENTPD8Q5MY95 495 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 UNQ6126/PRO20091Q6UXV3 157 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 LINC00114Q6XXX2 140 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 LRRC28Q86X40 367 aaPredicted RBP10.98□□□□□ -0.65
COPB1-209ENST00000533096 SPICQ8N5J4 248 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 BHLHE22Q8NFJ8 381 aaPredicted RBP10.98□□□□□ -0.65
COPB1-209ENST00000533096 OR2Z1Q8NG97 314 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 POM121L2Q96KW2 1035 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 PKP2Q99959 881 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 SIAEQ9HAT2 523 aa10.98□□□□□ -0.65
COPB1-209ENST00000533096 SSU72Q9NP77 194 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms