RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SEC61A2Q9H9S3 476 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 MAN2C1Q9NTJ4 1040 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 FBXO9Q9UK97 447 aaPredicted RBP14.45□□□□□ -0.1
PKP3-209ENST00000533069 TMEM5Q9Y2B1 443 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 HIF3AQ9Y2N7 669 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 ARID1AO14497 2285 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 C2CD3Q4AC94 2353 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 CADP27708 2225 aa14.45□□□□□ -0.1
PKP3-209ENST00000533069 IGHV2OR16-5A0A0B4J2B6 119 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 VSTM5A8MXK1 200 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 B9A039 149 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 DHHO43323 396 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 PIP5K1CO60331 668 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 RAB36O95755 333 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 LY6G6DO95868 133 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 NR2C1P13056 603 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 IFI30P13284 250 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 CALCRP30988 508 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 HSPA13P48723 471 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 TAF11Q15544 211 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 HIST3H3Q16695 136 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 SWI5Q1ZZU3 235 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 NRN1LQ496H8 165 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 LRFN4Q6PJG9 635 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 DPPA2Q7Z7J5 298 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 MYPOPQ86VE0 399 aaPredicted RBP14.44□□□□□ -0.1
PKP3-209ENST00000533069 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 SLC22A24Q8N4F4 322 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 MOSPD2Q8NHP6 518 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 SLC7A13Q8TCU3 470 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 ASB10Q8WXI3 467 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 FBXO17Q96EF6 278 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 CIB1Q99828 191 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 FUZQ9BT04 418 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 MRPL13Q9BYD1 178 aaKnown RBP14.44□□□□□ -0.1
PKP3-209ENST00000533069 ZNF556Q9HAH1 456 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 TMEM38BQ9NVV0 291 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 USE1Q9NZ43 259 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 ORC6Q9Y5N6 252 aa14.44□□□□□ -0.1
PKP3-209ENST00000533069 USF3Q68DE3 2245 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ZFHX3Q15911 3703 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 SH3PXD2BA1X283 911 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 SSX4O60224 188 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 FARS2O95363 451 aaKnown RBP14.43□□□□□ -0.1
PKP3-209ENST00000533069 QDPRP09417 244 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 OR8G3PP0DMU2 310 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 SAGP10523 405 aaPredicted RBP14.43□□□□□ -0.1
PKP3-209ENST00000533069 ACADSP16219 412 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 GSTM3P21266 225 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ZNF84P51523 738 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ALDH3A2P51648 485 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 HGFACQ04756 655 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 PRKCDQ05655 676 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 COX10Q12887 443 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 EFNB3Q15768 340 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ADIPOQQ15848 244 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 MST1LQ2TV78 715 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ALG10Q5BKT4 473 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ARMC4Q5T2S8 1044 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 CLEC2AQ6UVW9 174 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ZNF730Q6ZMV8 503 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 MBOAT2Q6ZWT7 520 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 NRMQ8IXM6 262 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 OR10G2Q8NGC3 310 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 OR52J3Q8NH60 311 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 RHNO1Q9BSD3 238 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 REG4Q9BYZ8 158 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 SMURF2Q9HAU4 748 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 ZNF224Q9NZL3 707 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 PDP1Q9P0J1 537 aaPredicted RBP14.43□□□□□ -0.1
PKP3-209ENST00000533069 KIF17Q9P2E2 1029 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 RHCGQ9UBD6 479 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 U3KQV3 271 aa14.43□□□□□ -0.1
PKP3-209ENST00000533069 NIPBLQ6KC79 2804 aaeCLIP14.43□□□□□ -0.12e-6■■■■□ 19.3
PKP3-209ENST00000533069 SAC3D1A6NKF1 404 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 RNF223E7ERA6 249 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 OR4A8P0C604 315 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 ZNF14P17017 642 aaPredicted RBP14.42□□□□□ -0.1
PKP3-209ENST00000533069 PEX2P28328 305 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 GIPRP48546 466 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 SLC9A3P48764 834 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 ZNF133P52736 654 aaPredicted RBP14.42□□□□□ -0.1
PKP3-209ENST00000533069 EFNA4P52798 201 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 RAD23AP54725 363 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 RAB1AP62820 205 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 RUNX1T1Q06455 604 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 PIGFQ07326 219 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 DAG1Q14118 895 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 FAM205BPQ63HN1 556 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 VHLLQ6RSH7 139 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 SKA3Q8IX90 412 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 OR4K5Q8NGD3 323 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 MCHR2Q969V1 340 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 POM121Q96HA1 1249 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 DGCR6LQ9BY27 220 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 TXNIPQ9H3M7 391 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 NOX3Q9HBY0 568 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 SPEF1Q9Y4P9 236 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 FKBP7Q9Y680 259 aa14.42□□□□□ -0.1
PKP3-209ENST00000533069 A0A087WUU8 490 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms