RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RAB22AQ9UL26 194 aa13.97□□□□□ -0.17
PCDHA3-202ENST00000532566 MYO16Q9Y6X6 1858 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 ANKRD30BLA7E2S9 258 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 ZNF806P0C7X5 589 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 GZMMP51124 257 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 BAK1Q16611 211 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 SLC36A2Q495M3 483 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 ZNF679Q8IYX0 411 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 OR52I2Q8NH67 350 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 BRWD1Q9NSI6 2320 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 OTOL1A6NHN0 477 aaPredicted RBP13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 ZNF254O75437 659 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 SOD1P00441 154 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 NAGAP17050 411 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 CLDN6P56747 220 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 FZD2Q14332 565 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 FAM27D1Q5T7N8 215 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 OR4C3Q8NH37 302 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 SP7Q8TDD2 431 aaPredicted RBP13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
PCDHA3-202ENST00000532566 IFITM5A6NNB3 132 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 LIMS3P0CW19 117 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 LIMS4P0CW20 117 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 EFNA3P52797 238 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 MOB3CQ70IA8 216 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 PGAP1Q75T13 922 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 ARL11Q969Q4 196 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 CMSS1Q9BQ75 279 aaKnown RBP13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC25A21Q9BQT8 299 aaPredicted RBP13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 PPA2Q9H2U2 334 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC52A3Q9NQ40 469 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 MRPS2Q9Y399 296 aaKnown RBP13.96□□□□□ -0.18
PCDHA3-202ENST00000532566 LOC107986453A0A1B0GWG9 222 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 PRKACBP22694 351 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 EPHA4P54764 986 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 OPCMLQ14982 345 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 FXNQ16595 210 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 GJC3Q8NFK1 279 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 CPT1CQ8TCG5 803 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 EIF5A2Q9GZV4 153 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ACKR4Q9NPB9 350 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 OR8U9P0C7N5 309 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 RPL19P84098 196 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 EGR3Q06889 387 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 FGL2Q14314 439 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 SSX1Q16384 188 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 PRTGQ2VWP7 1150 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 MRM1Q6IN84 353 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF585AQ6P3V2 769 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 TXNIPQ9H3M7 391 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ASF1BQ9NVP2 202 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 PRSS37A4D1T9 235 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 DDAH2O95865 285 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ENPP1P22413 925 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 NFYAP23511 347 aaPredicted RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 BLVRBP30043 206 aaPredicted RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 RGS19P49795 217 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 CAV2P51636 162 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 IL10RAQ13651 578 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 PRICKLE4Q2TBC4 344 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 EXOSC6Q5RKV6 272 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 NPSR1Q6W5P4 371 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 DCLRE1CQ96SD1 692 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ANKRD61A6NGH8 418 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 HSPB2A8KAH6 182 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 K7EQS6 105 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC2A1P11166 492 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 TPT1P13693 172 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 TCN2P20062 427 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 CAMLGP49069 296 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 HSPB2Q16082 182 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 UBE3DQ7Z6J8 389 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 LIX1LQ8IVB5 337 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 DVL3Q92997 716 aaPredicted RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 SEC22CQ9BRL7 303 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 UTP23Q9BRU9 249 aaKnown RBP13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 PCED1AQ9H1Q7 454 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 ENY2Q9NPA8 101 aa13.95□□□□□ -0.18
PCDHA3-202ENST00000532566 EIF4EP06730 217 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 MAP2K6P52564 334 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CARD18P57730 90 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 SEC61A1P61619 476 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 FOXK1P85037 733 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 KIAA0907Q7Z7F0 614 aaPredicted RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 ZFAND1Q8TCF1 268 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 MIB2Q96AX9 1013 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 TSPAN10Q9H1Z9 355 aaPredicted RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 RGCCQ9H4X1 137 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 OR7C1O76099 320 aaPredicted RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 C1QBP02746 253 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 HOXB5P09067 269 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CPT2P23786 658 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CRYBB2P43320 205 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms