RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ACY1Q03154 408 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 TGM3Q08188 693 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 TMEM201Q5SNT2 666 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 LIPJQ5W064 366 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 C11orf87Q6NUJ2 197 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 ACSM5Q6NUN0 579 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 ARHGAP11AQ6P4F7 1023 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 UBALD2Q8IYN6 164 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM71E2Q8N5Q1 922 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 PPP1R1CQ8WVI7 109 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 WDR92Q96MX6 357 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 PDFQ9HBH1 243 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 CA10Q9NS85 328 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 KLK11Q9UBX7 282 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 PPT2Q9UMR5 302 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 ICKQ9UPZ9 632 aa6.23□□□□□ -1.41
TGFBR3-209ENST00000532540 CACNA1AO00555 2505 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 C20orf202A1L168 122 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PMS2P1A4D2B8 440 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ARRDC5A6NEK1 342 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 BLOC1S5-TXNDC5H3BN57 136 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 HLA-DQA2P01906 255 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 KLK1P06870 262 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR13C7P0DN81 318 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 FRKP42685 505 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 KIR2DL1P43626 348 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 POU3F4P49335 361 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CXADRP78310 365 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CDK3Q00526 305 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ENPP2Q13822 863 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 MELKQ14680 651 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 EBPQ15125 230 aaKnown RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 TP53I3Q53FA7 332 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 STEAP1BQ6NZ63 245 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 POMZP3Q6PJE2 187 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 RPTNQ6XPR3 784 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 TMEM184AQ6ZMB5 413 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 RNF44Q7L0R7 432 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC16A9Q7RTY1 509 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 C17orf64Q86WR6 236 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SPEM1Q8N4L4 309 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 NUBPLQ8TB37 319 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 C16orf78Q8WTQ4 265 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SMPDL3AQ92484 453 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 EDAQ92838 391 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 TGM7Q96PF1 710 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 MCHR1Q99705 422 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 JAM3Q9BX67 310 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR11A1Q9GZK7 315 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SLCO1C1Q9NYB5 712 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PISDQ9UG56 409 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 TAC3Q9UHF0 121 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 A0A1W2PS29 197 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR5H15A6NDH6 313 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF860A6NHJ4 632 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR5H1A6NKK0 313 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CLDN4O14493 209 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SOX15O60248 233 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ARG1P05089 322 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 RPLP1P05386 114 aaKnown RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PVRP15151 417 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CR2P20023 1033 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 NAA10P41227 235 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 HNF4GQ14541 408 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PGGHGQ32M88 737 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC25A35Q3KQZ1 300 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 MOGAT2Q3SYC2 334 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 AWAT1Q58HT5 328 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 FAM27D1Q5T7N8 215 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 AFMIDQ63HM1 303 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 C19orf48Q6RUI8 117 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 LCTLQ6UWM7 567 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 Q6ZRG5 221 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR2L3Q8NG85 312 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 OR5AR1Q8NGP9 310 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 LKAAEAR1Q8TD35 194 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 THEM6Q8WUY1 208 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SAMD8Q96LT4 415 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 UBL7Q96S82 380 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PRRT1Q99946 306 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 NRIP2Q9BQI9 281 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 SLC25A19Q9HC21 320 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 NPIPB9F8W1W9 429 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 TCF21O43680 179 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 GPR37L1O60883 481 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 EFEMP2O95967 443 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CHRM4P08173 479 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PGAM2P15259 253 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 HTR1FP30939 366 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 RBMXP38159 391 aaKnown RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CDX1P47902 265 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CCR4P51679 360 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ZNF140P52738 457 aaPredicted RBP6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 CLDN6P56747 220 aa6.22□□□□□ -1.41
TGFBR3-209ENST00000532540 ZXDAP98168 799 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms