RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CGREF1Q99674 301 aa15.66■□□□□ 0.1
SSSCA1-206ENST00000531405 MRPL13Q9BYD1 178 aaKnown RBP15.66■□□□□ 0.1
SSSCA1-206ENST00000531405 SLC19A3Q9BZV2 496 aa15.66■□□□□ 0.1
SSSCA1-206ENST00000531405 LRMDAQ9H2I8 198 aa15.66■□□□□ 0.1
SSSCA1-206ENST00000531405 A0A1W2PRG6 482 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 SPRY3O43610 288 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 TRMUO75648 421 aaKnown RBP15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 IGHV3-13P01766 116 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 MPV17P39210 176 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 WNT5AP41221 380 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 ZNF81P51508 661 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 CRYBA2P53672 197 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 UGT2B15P54855 530 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 HFEQ30201 348 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 NRN1LQ496H8 165 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 ZNF101Q8IZC7 436 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 SLC26A7Q8TE54 656 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 IPCEF1Q8WWN9 437 aaPredicted RBP15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 C22orf15Q8WYQ4 148 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 THOC1Q96FV9 657 aaKnown RBP15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 SEPHS2Q99611 448 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 RBM4Q9BWF3 364 aaKnown RBP15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 PCDHAC1Q9H158 963 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 ESM1Q9NQ30 184 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 NDUFAF1Q9Y375 327 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 UGT2A1Q9Y4X1 527 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 TRRAPQ9Y4A5 3859 aa15.65■□□□□ 0.1
SSSCA1-206ENST00000531405 IGKV1D-43A0A0B4J1Z2 117 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 IGHV1-46P01743 117 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 MT-ND5P03915 603 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 ACADSP16219 412 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 ZNF32P17041 273 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 TNFRSF1BP20333 461 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 STOMP27105 288 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 PCGF2P35227 344 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 AQP2P41181 271 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 FMODQ06828 376 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 THEM4Q5T1C6 240 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 C10orf128Q5T292 105 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 PATL1Q86TB9 770 aaKnown RBP15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 NKAIN4Q8IVV8 208 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 DPP10Q8N608 796 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 TEX29Q8N6K0 151 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 OR10A6Q8NH74 314 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 AKR7LQ8NHP1 331 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 MOSPD2Q8NHP6 518 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 TMEM255BQ8WV15 326 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 CCL17Q92583 94 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 NABP1Q96AH0 204 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 ZMYND19Q96E35 227 aaPredicted RBP15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 TIMD4Q96H15 378 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 JMJD8Q96S16 334 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 GAL3ST1Q99999 423 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 KAT8Q9H7Z6 458 aaKnown RBP15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 NANOGQ9H9S0 305 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 CCNB1IP1Q9NPC3 277 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 C20orf141Q9NUB4 165 aa15.64■□□□□ 0.09
SSSCA1-206ENST00000531405 DOCK11Q5JSL3 2073 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 LOC100509620A0A075B734 347 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 ISPDA4D126 451 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 ANGPT2O15123 496 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 MGRN1O60291 552 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 SHOX2O60902 331 aaPredicted RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 OR7A10O76100 309 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 MT-ND1P03886 318 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 FUT1P19526 365 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 RBMXP38159 391 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 MMP15P51511 669 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 ZNF133P52736 654 aaPredicted RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 LCN2P80188 198 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 NFYCQ13952 458 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 SGCAQ16586 387 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 MOGQ16653 247 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 SPRNQ5BIV9 151 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 BEND6Q5SZJ8 279 aaPredicted RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 BPIFB2Q8N4F0 458 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 ZDHHC22Q8N966 263 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 NANPQ8TBE9 248 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 NSMAFQ92636 917 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 HDAC2Q92769 488 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 RAB1CQ92928 201 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 ELMOD3Q96FG2 381 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 MARS2Q96GW9 593 aaKnown RBP15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 POM121L2Q96KW2 1035 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 C7orf69Q9H7B7 122 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 SIAEQ9HAT2 523 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 INIPQ9NRY2 104 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 OPN4Q9UHM6 478 aa15.63■□□□□ 0.09
SSSCA1-206ENST00000531405 C5orf49A4QMS7 147 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 ZSCAN5BA6NJL1 495 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 J3QLI3 93 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 GCH1P30793 250 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 DAP3P51398 398 aaKnown RBP15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 ERVK-25P63136 954 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 MRPS34P82930 218 aaKnown RBP15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 ZNF718Q3SXZ3 478 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 AWAT1Q58HT5 328 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 ARMC4Q5T2S8 1044 aa15.62■□□□□ 0.09
SSSCA1-206ENST00000531405 AGBL2Q5U5Z8 902 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms