RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF101Q8IZC7 436 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 GALNT4Q8N4A0 578 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 ANKFN1Q8N957 763 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 ADPRHL1Q8NDY3 354 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 OR4S1Q8NGB4 309 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 OR6N1Q8NGY5 312 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 CFHR4Q92496 578 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 COQ8BQ96D53 544 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 DHRS1Q96LJ7 313 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 ARHGDIGQ99819 225 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 B9D2Q9BPU9 175 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 PCGF1Q9BSM1 259 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 C1orf50Q9BV19 199 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 A4GALTQ9NPC4 353 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 CYSLTR2Q9NS75 346 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 ZNF180Q9UJW8 692 aa6.82□□□□□ -1.32
CD44-232ENST00000531118 PLECQ15149 4684 aaKnown RBP6.82□□□□□ -1.32
CD44-232ENST00000531118 ALMS1Q8TCU4 4167 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 A0A0U1RQK1 487 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 KIR2DS1A0A191URI9 304 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 C22orf46C9J442 243 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 G3V2L1 256 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 P2RY10O00398 339 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 LYPLA1O75608 230 aaPredicted RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 MYL2P10916 166 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 WNT5AP41221 380 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 ACAA2P42765 397 aaKnown RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 CSNK1A1P48729 337 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 COPZ1P61923 177 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 GNA13Q14344 377 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 NRN1LQ496H8 165 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 FAM69AQ5T7M9 428 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 MBNL2Q5VZF2 373 aaKnown RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 KANK2Q63ZY3 851 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 ZYG11AQ6WRX3 759 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 PIWIL3Q7Z3Z3 882 aaKnown RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 SLC22A24Q8N4F4 322 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 OR4A15Q8NGL6 344 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 OR1J2Q8NGS2 313 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 SLC25A40Q8TBP6 338 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 Q96M66 194 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 TBX15Q96SF7 602 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 NAPGQ99747 312 aaPredicted RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 SH3GL3Q99963 347 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 CDADC1Q9BWV3 514 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 MSL2Q9HCI7 577 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 ACOXLQ9NUZ1 547 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 RLIMQ9NVW2 624 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 KIF17Q9P2E2 1029 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 VPREB3Q9UKI3 123 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 EMCNQ9ULC0 261 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 ZDHHC8Q9ULC8 765 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 FOXJ3Q9UPW0 622 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 UTP11Q9Y3A2 253 aaKnown RBP6.81□□□□□ -1.32
CD44-232ENST00000531118 PCDHGB5Q9Y5G0 923 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 SAR1BQ9Y6B6 198 aa6.81□□□□□ -1.32
CD44-232ENST00000531118 CENPVL3A0A0U1RRI6 287 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 LOC102725191A0A1B0GVB3 256 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 WI2-2373I1.2A0A1W2PRP0 233 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 CDHR4A6H8M9 788 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 HMGN4O00479 90 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 ENSAO43768 121 aaKnown RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 ENTPD5O75356 428 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 FARS2O95363 451 aaKnown RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 CHEK2O96017 543 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 DBIP07108 87 aaKnown RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 SNRPAP09012 282 aaKnown RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 PRG2P13727 222 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 MMP9P14780 707 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 IL7RP16871 459 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 TNFRSF1AP19438 455 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 NCF2P19878 526 aaPredicted RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 CPT2P23786 658 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 GABRA5P31644 462 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 ARRB2P32121 409 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 LIPAP38571 399 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 PITPNBP48739 271 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 EFNB2P52799 333 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 SYPL1Q16563 259 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 SMU1Q2TAY7 513 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 LIN52Q52LA3 116 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 XKR7Q5GH72 579 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 CFAP157Q5JU67 520 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 THEM4Q5T1C6 240 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 OR4F3Q6IEY1 312 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 LRRC74BQ6ZQY2 392 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 H1FNTQ75WM6 255 aaPredicted RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 RIMKLAQ8IXN7 391 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 LYG1Q8N1E2 194 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 MIER2Q8N344 545 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 RBM15BQ8NDT2 890 aaKnown RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 OR8B3Q8NGG8 313 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 VANGL1Q8TAA9 524 aaPredicted RBP6.8□□□□□ -1.32
CD44-232ENST00000531118 TWIST2Q8WVJ9 160 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 ITLN1Q8WWA0 313 aa6.8□□□□□ -1.32
CD44-232ENST00000531118 SLC38A4Q969I6 547 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms