RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 PPIAL4DF5H284 164 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 UBOX5O94941 541 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 PPIAL4FP0DN26 164 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 STOMP27105 288 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 APLNRP35414 380 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 FOXL1Q12952 345 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 ZNF718Q3SXZ3 478 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 TSPYL5Q86VY4 417 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-219ENST00000530495 RBM45Q8IUH3 476 aaKnown RBP12.66□□□□□ -0.38
CAPN1-219ENST00000530495 OR4D11Q8NGI4 311 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 MARS2Q96GW9 593 aaKnown RBP12.66□□□□□ -0.38
CAPN1-219ENST00000530495 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 EBF4Q9BQW3 602 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 PCDHAC1Q9H158 963 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 SIAEQ9HAT2 523 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 MEPEQ9NQ76 525 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-219ENST00000530495 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
CAPN1-219ENST00000530495 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
CAPN1-219ENST00000530495 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 BLOC1S5-TXNDC5H3BN57 136 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 KPNA4O00629 521 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-219ENST00000530495 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 SPRY3O43610 288 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 OPN1SWP03999 348 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 ADH4P08319 380 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 HKR1P10072 659 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 ACADSP16219 412 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 MAKP20794 623 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 CCNOP22674 350 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 GCH1P30793 250 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 LIPAP38571 399 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 UGT2B15P54855 530 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 LCN2P80188 198 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
CAPN1-219ENST00000530495 HSF2Q03933 536 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 GLO1Q04760 184 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 AGKQ53H12 422 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 TMEM255AQ5JRV8 349 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 THEM4Q5T1C6 240 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
CAPN1-219ENST00000530495 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 UNQ6126/PRO20091Q6UXV3 157 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 C1orf174Q8IYL3 243 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 SYT14Q8NB59 555 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 TLCD1Q96CP7 247 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 GAL3ST1Q99999 423 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 EIF3KQ9UBQ5 218 aaKnown RBP12.65□□□□□ -0.38
CAPN1-219ENST00000530495 KLHL21Q9UJP4 597 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
CAPN1-219ENST00000530495 LOC100509620A0A075B734 347 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 PLSCR5A0PG75 271 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 TRMUO75648 421 aaKnown RBP12.64□□□□□ -0.39
CAPN1-219ENST00000530495 F13BP05160 661 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 UMPSP11172 480 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 MPV17P39210 176 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 WNT5AP41221 380 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 ATP4BP51164 291 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 RPL18Q07020 188 aaKnown RBP12.64□□□□□ -0.39
CAPN1-219ENST00000530495 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF101Q8IZC7 436 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 NOXO1Q8NFA2 376 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 VANGL1Q8TAA9 524 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-219ENST00000530495 KLF14Q8TD94 323 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-219ENST00000530495 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 SMURF2Q9HAU4 748 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 CYSLTR2Q9NS75 346 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-219ENST00000530495 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 UGT2A1Q9Y4X1 527 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 PPIAL4AQ9Y536 164 aa12.64□□□□□ -0.39
CAPN1-219ENST00000530495 C5orf49A4QMS7 147 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ZSCAN5BA6NJL1 495 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 FOXH1O75593 365 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 MT-ND1P03886 318 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 CD55P08174 381 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF32P17041 273 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 FUT1P19526 365 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 CD247P20963 164 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ZFP36P26651 326 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 CDAP32320 146 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 CYP51A1Q16850 503 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms