RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 OR10A3P58181 314 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 EIF2B1Q14232 305 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 RHOUQ7L0Q8 258 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC26A10Q8NG04 563 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 OR52N5Q8NH56 324 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 DNAJA3Q96EY1 480 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC25A44Q96H78 314 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 PIGQQ9BRB3 760 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 MRPL13Q9BYD1 178 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 MRPS18CQ9Y3D5 142 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 AQP7P3A6NL99 342 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 IFITM5A6NNB3 132 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 TTLL8A6PVC2 850 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 PSMD9O00233 223 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 PIN1P1O15428 100 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 UBL3O95164 117 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 P04436 131 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CELA2AP08217 269 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF43P17038 809 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 ATF1P18846 271 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 OTX2P32243 289 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 P2RY4P51582 365 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 BIDP55957 195 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CSNK2A1P68400 391 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 SLC25A35Q3KQZ1 300 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM176BQ3YBM2 270 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 UBE2NLQ5JXB2 153 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 PRAMEF20Q5VT98 475 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 NRARPQ7Z6K4 114 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 KDM8Q8N371 416 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 IL17RDQ8NFM7 739 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 OR10H5Q8NGA6 315 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 ZNF671Q8TAW3 534 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 ABHD6Q9BV23 337 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 BRD7Q9NPI1 651 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 TMEM9BQ9NQ34 198 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 B3GAT1Q9P2W7 334 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 AK6Q9Y3D8 172 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 ETV7Q9Y603 341 aa13.22□□□□□ -0.29
ECHDC1-220ENST00000528402 A0A1W2PPK0 400 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 TRABD2BA6NFA1 517 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF726A6NNF4 738 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 CTDSPLO15194 276 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 SULT1B1O43704 296 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 CCL3P10147 92 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 SPNP16150 400 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 CFPP27918 469 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 LAP3P28838 519 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RFX2P48378 723 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 CLRN1P58418 232 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RAC1P63000 192 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 ETFDHQ16134 617 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 STAC2Q6ZMT1 411 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF704Q6ZNC4 412 aaPredicted RBP13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RDH10Q8IZV5 341 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 DUSP18Q8NEJ0 188 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 OR4M1Q8NGD0 313 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RAB40AQ8WXH6 277 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RGP1Q92546 391 aaPredicted RBP13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 WACQ9BTA9 647 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 PROK2Q9HC23 129 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 DKKL1Q9UK85 242 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 HRH3Q9Y5N1 445 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 R4GMQ9 66 aa13.21□□□□□ -0.3
ECHDC1-220ENST00000528402 ACOD1A6NK06 481 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 SHISA8B8ZZ34 492 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 PLA2G10O15496 165 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 CD2P06729 351 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 EIF4EP06730 217 aaKnown RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 TRAPPC2P0DI81 140 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 TRAPPC2BP0DI82 140 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 SRD5A2P31213 254 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 MAP2K3P46734 347 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 MMP15P51511 669 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 POU4F3Q15319 338 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 P2RY14Q15391 338 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 INPP5JQ15735 1006 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 WDR38Q5JTN6 314 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 NOXO1Q8NFA2 376 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 ENKURQ8TC29 256 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 MCHR2Q969V1 340 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 RFT1Q96AA3 541 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 INTS12Q96CB8 462 aaKnown RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 THAP7Q9BT49 309 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 C11orf54Q9H0W9 315 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 NIPAL2Q9H841 368 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 MED29Q9NX70 200 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 FOXJ3Q9UPW0 622 aa13.2□□□□□ -0.3
ECHDC1-220ENST00000528402 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 C9orf172C9J069 976 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms