RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FABP12A6NFH5 140 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 E7EWF7 191 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 RFXANKO14593 260 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 P2RX6O15547 441 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 SEMA3DO95025 777 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 HOXD4P09016 255 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 ANXA3P12429 323 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 BGNP21810 368 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 RPL13AP40429 203 aaKnown RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 ERVK-25P63136 954 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 KCNJ2P63252 427 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 OC90Q02509 493 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 RBBP4Q09028 425 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 CHI3L2Q15782 390 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 ECSCRQ19T08 205 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 DEFB115Q30KQ5 88 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 VPS26BQ4G0F5 336 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 TTMPQ5BVD1 217 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 NEPROQ6NW34 567 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 ERI1Q8IV48 349 aaKnown RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 OR10A7Q8NGE5 316 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 OR52E5Q8NH55 327 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 MAGEE2Q8TD90 523 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 SMARCD2Q92925 531 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 TOMM40LQ969M1 308 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 C11orf52Q96A22 123 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 OTUB2Q96DC9 234 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 DYNLL2Q96FJ2 89 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 ALKBH3Q96Q83 286 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 ERGIC2Q96RQ1 377 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 NAPGQ99747 312 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 CCDC28BQ9BUN5 200 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 SLC25A51Q9H1U9 297 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 OR51V1Q9H2C8 321 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 RNF41Q9H4P4 317 aaPredicted RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 SIGLEC8Q9NYZ4 499 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 EIF3LQ9Y262 564 aaKnown RBP4.61□□□□□ -1.67
PCF11-202ENST00000528336 SLC6A5Q9Y345 797 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 LRRC42Q9Y546 428 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 FADS3Q9Y5Q0 445 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 AUP1Q9Y679 476 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 FRMPD4Q14CM0 1322 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 TRPM7Q96QT4 1865 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CDK5RAP2Q96SN8 1893 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 TRBV9A0A0B4J1U6 114 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 A0A1W2PRD5 423 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CCDC182A6NF36 153 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SRRM5B3KS81 715 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 H3BMH7 237 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 B4GALT5O43286 388 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 AIREO43918 545 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 GALR3O60755 368 aaPredicted RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 HUS1O60921 280 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 ZMPSTE24O75844 475 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 FGF19O95750 216 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 ALDOBP05062 364 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SLC35E2BP0CK96 405 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SLC35E2P0CK97 266 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 MYL2P10916 166 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 PSKH1P11801 424 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 IMPDH1P20839 514 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 DCKP27707 260 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 TEAD1P28347 426 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CDKN2CP42773 168 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 HSPA13P48723 471 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CSNK1DP48730 415 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 RIDAP52758 137 aaKnown RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 CRYBA2P53672 197 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 RPS4XP62701 263 aaKnown RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 CYTH1Q15438 398 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SIX1Q15475 284 aaPredicted RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 ZNF239Q16600 458 aaKnown RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 GOLGA7BQ2TAP0 167 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 RFTN2Q52LD8 501 aaPredicted RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 COQ5Q5HYK3 327 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 LY6G6FQ5SQ64 297 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 C1orf220Q5T0J3 134 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 HHATQ5VTY9 493 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 GPR107Q5VW38 600 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 C22orf42Q6IC83 251 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 ZNF774Q6NX45 483 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 ENPP6Q6UWR7 440 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CLEC18BQ6UXF7 455 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 Q6ZSR3 168 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 TMEM179Q6ZVK1 233 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CDC20BQ86Y33 519 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CSNK1A1LQ8N752 337 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 INO80EQ8NBZ0 244 aaPredicted RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 NECAP1Q8NC96 275 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 TMEM239Q8WW34 195 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 PPP1R14BQ96C90 147 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 OPTNQ96CV9 577 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CAPNS2Q96L46 248 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 FMO2Q99518 471 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 C7orf50Q9BRJ6 194 aaKnown RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 FEM1AQ9BSK4 669 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 RPP25Q9BUL9 199 aaKnown RBP4.6□□□□□ -1.67
PCF11-202ENST00000528336 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 MOB1AQ9H8S9 216 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 S100A14Q9HCY8 104 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms