RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 PCDHGB1Q9Y5G3 927 aa4.8□□□□□ -1.64
CHKA-204ENST00000528235 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 A0A087WV62 115 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 A6NIZ1 184 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SDR42E2A6NKP2 422 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF716A6NP11 495 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 WASHC1A8K0Z3 465 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 LEUTXA8MZ59 168 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 VWC2LB2RUY7 222 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SHISA9B4DS77 424 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 LRRN3E7EW58 273 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 H7C417 338 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 SLC16A6O15403 523 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SGCEO43556 437 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SS18L1O75177 396 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 STX11O75558 287 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ERAL1O75616 437 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 SCELO95171 688 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 PSMG1O95456 288 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 DIRAS3O95661 229 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 AIFM1O95831 613 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ANGPTL1O95841 491 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CSTBP04080 98 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 CTXN2P0C2S0 81 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CT62P0C5K7 136 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF735P0CB33 412 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SMIM18P0DKX4 95 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 NR2F6P10588 404 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 NCF1P14598 390 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 IL12AP29459 219 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 IL12BP29460 328 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 DDOSTP39656 456 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CEACAM6P40199 344 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 NR4A2P43354 598 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CDKN2DP55273 166 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CLDN8P56748 225 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CLDN20P56880 219 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 B3GALT5-AS1P59052 145 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ESRRGP62508 458 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CDKL1Q00532 357 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 TIAL1Q01085 375 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHKA-204ENST00000528235 IRF8Q02556 426 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 MGAT5Q09328 741 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 DBPQ10586 325 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 LCP2Q13094 533 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ASAH1Q13510 395 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 IL18Q14116 193 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 PTGR1Q14914 329 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CNN3Q15417 329 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 DECR1Q16698 335 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 HSD17B12Q53GQ0 312 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 FAM69AQ5T7M9 428 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 C11orf71Q6IPW1 123 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF544Q6NX49 715 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SLC22A25Q6T423 547 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 UGT2A3Q6UWM9 527 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 TFAP2EQ6VUC0 442 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 PEG10Q86TG7 708 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 GPAT4Q86UL3 456 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 TMEM17Q86X19 198 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ADGRG3Q86Y34 549 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 MISPQ8IVT2 679 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 LNX2Q8N448 690 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 OR2C3Q8N628 320 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF615Q8N8J6 731 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ATG16L2Q8NAA4 619 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SEMA6DQ8NFY4 1073 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 OR52B6Q8NGF0 335 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 OR52H1Q8NGJ2 320 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 OR5M1Q8NGP8 315 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 AKR7LQ8NHP1 331 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 BBS10Q8TAM1 723 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 NANPQ8TBE9 248 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 MRGPRDQ8TDS7 321 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 KISS1RQ969F8 398 aaPredicted RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 UBE2E3Q969T4 207 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 RGMAQ96B86 450 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ELP4Q96EB1 424 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CMTM7Q96FZ5 175 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 DUS3LQ96G46 650 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 COL21A1Q96P44 957 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF385AQ96PM9 386 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 TRMOQ9BU70 441 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 THUMPD3Q9BV44 507 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 PTDSS2Q9BVG9 487 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
CHKA-204ENST00000528235 ITPAQ9BY32 194 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 TOLLIPQ9H0E2 274 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 DSN1Q9H410 356 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 ARMC7Q9H6L4 198 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 PTGES2Q9H7Z7 377 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 CXorf21Q9HAI6 301 aa4.79□□□□□ -1.64
CHKA-204ENST00000528235 BRF2Q9HAW0 419 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms