RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ZNF133P52736 654 aaPredicted RBP20■□□□□ 0.79
CPSF1-202ENST00000527827 SELPLGQ14242 412 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 PABPC1L2AQ5JQF8 200 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 NANOGNBQ7Z5D8 188 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF101Q8IZC7 436 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 BPIFB2Q8N4F0 458 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 SYT14Q8NB59 555 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 ELMOD3Q96FG2 381 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 TIMD4Q96H15 378 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 PRSS27Q9BQR3 290 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 PCDHAC1Q9H158 963 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 C7orf69Q9H7B7 122 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 TMBIM4Q9HC24 238 aa20■□□□□ 0.79
CPSF1-202ENST00000527827 MEPEQ9NQ76 525 aaPredicted RBP20■□□□□ 0.79
CPSF1-202ENST00000527827 BLOC1S5-TXNDC5H3BN57 136 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 TRMUO75648 421 aaKnown RBP19.99■□□□□ 0.79
CPSF1-202ENST00000527827 F13BP05160 661 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 GATA3P23771 443 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 MPV17P39210 176 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 WNT5AP41221 380 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 ATP4BP51164 291 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 MMP15P51511 669 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 UGT2B15P54855 530 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 UBA52P62987 128 aaKnown RBP19.99■□□□□ 0.79
CPSF1-202ENST00000527827 HSF2Q03933 536 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 RPL18Q07020 188 aaKnown RBP19.99■□□□□ 0.79
CPSF1-202ENST00000527827 FAM209AQ5JX71 171 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 C10orf128Q5T292 105 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 ASB10Q8WXI3 467 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 DVL3Q92997 716 aaPredicted RBP19.99■□□□□ 0.79
CPSF1-202ENST00000527827 MARS2Q96GW9 593 aaKnown RBP19.99■□□□□ 0.79
CPSF1-202ENST00000527827 POM121L2Q96KW2 1035 aa19.99■□□□□ 0.79
CPSF1-202ENST00000527827 CENPBD1B2RD01 187 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 SPRY3O43610 288 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 UBOX5O94941 541 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 PRSS23O95084 383 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 ACADSP16219 412 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 CCNOP22674 350 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 CYP51A1Q16850 503 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 SPATA46Q5T0L3 261 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 THEM4Q5T1C6 240 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF771Q7L3S4 317 aaPredicted RBP19.98■□□□□ 0.79
CPSF1-202ENST00000527827 IPCEF1Q8WWN9 437 aaPredicted RBP19.98■□□□□ 0.79
CPSF1-202ENST00000527827 C22orf15Q8WYQ4 148 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 CCL17Q92583 94 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 TAMM41Q96BW9 452 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 GAL3ST1Q99999 423 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 SIAEQ9HAT2 523 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 UGT2A1Q9Y4X1 527 aa19.98■□□□□ 0.79
CPSF1-202ENST00000527827 A0A1W2PRG6 482 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 ZSCAN5BA6NJL1 495 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 MGRN1O60291 552 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF32P17041 273 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 STOMP27105 288 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 CDAP32320 146 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 MTPNP58546 118 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 LCN2P80188 198 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 MRPS34P82930 218 aaKnown RBP19.97■□□□□ 0.79
CPSF1-202ENST00000527827 TUSC1Q2TAM9 212 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF718Q3SXZ3 478 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 RETREG3Q86VR2 466 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 NABP1Q96AH0 204 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 PCDHGB1Q9Y5G3 927 aa19.97■□□□□ 0.79
CPSF1-202ENST00000527827 LOC100509620A0A075B734 347 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 IGKV1D-43A0A0B4J1Z2 117 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 MCIDASD6RGH6 385 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 SLC2A10O95528 541 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 SPRNQ5BIV9 151 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 DHDDSQ86SQ9 333 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 PATL1Q86TB9 770 aaKnown RBP19.96■□□□□ 0.79
CPSF1-202ENST00000527827 SLC25A40Q8TBP6 338 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 NMD3Q96D46 503 aaKnown RBP19.96■□□□□ 0.79
CPSF1-202ENST00000527827 CGREF1Q99674 301 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 ZNF747Q9BV97 191 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 CCNB1IP1Q9NPC3 277 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 LEF1Q9UJU2 399 aaPredicted RBP19.96■□□□□ 0.79
CPSF1-202ENST00000527827 PPIAL4AQ9Y536 164 aa19.96■□□□□ 0.79
CPSF1-202ENST00000527827 OR7A10O76100 309 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 MT-ND1P03886 318 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 ADH4P08319 380 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 FUT1P19526 365 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 FPR2P25090 351 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 ZFP36P26651 326 aaKnown RBP19.95■□□□□ 0.78
CPSF1-202ENST00000527827 GCH1P30793 250 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 PCGF2P35227 344 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 AQP2P41181 271 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 CRYBA2P53672 197 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 HNRNPA0Q13151 305 aaKnown RBP19.95■□□□□ 0.78
CPSF1-202ENST00000527827 PRR31Q5SQ13 230 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 ARMC4Q5T2S8 1044 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 MBNL2Q5VZF2 373 aaKnown RBP19.95■□□□□ 0.78
CPSF1-202ENST00000527827 DPP10Q8N608 796 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 AKR7LQ8NHP1 331 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 PFN4Q8NHR9 129 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 KLF14Q8TD94 323 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-202ENST00000527827 OR2J1Q9GZK6 312 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 KCNN2Q9H2S1 579 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 KAT8Q9H7Z6 458 aaKnown RBP19.95■□□□□ 0.78
CPSF1-202ENST00000527827 NTN4Q9HB63 628 aa19.95■□□□□ 0.78
CPSF1-202ENST00000527827 INIPQ9NRY2 104 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms