RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 KRTAP10-3P60369 221 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 ABCE1P61221 599 aaKnown RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 SEC61A1P61619 476 aaKnown RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 BTG1P62324 171 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 DEFB112Q30KQ8 113 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 MS4A18Q3C1V0 323 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 Q6YL49 198 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 ZNF620Q6ZNG0 422 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 PXKQ7Z7A4 578 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 SERPINA11Q86U17 422 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 LRRC28Q86X40 367 aaPredicted RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 FAM110DQ8TAY7 271 aaPredicted RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 IPCEF1Q8WWN9 437 aaPredicted RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 DYRK2Q92630 601 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 PANX1Q96RD7 426 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 EPYCQ99645 322 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 CHIAQ9BZP6 476 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 RNF121Q9H920 327 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 MARCH7Q9H992 704 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 NANOGQ9H9S0 305 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 TMEM106BQ9NUM4 274 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 TMEM38BQ9NVV0 291 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 KLHL14Q9P2G3 628 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.07□□□□□ -0.96
CTSB-212ENST00000526645 EGFL7Q9UHF1 273 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 HAO1Q9UJM8 370 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 IFT52Q9Y366 437 aa9.07□□□□□ -0.96
CTSB-212ENST00000526645 IGHV2-70DA0A0C4DH43 119 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 CCDC154A6NI56 674 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 E9PBE3 544 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 KRT75O95678 551 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 HPRP00739 348 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 CSF1P09603 554 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 CCL2P13500 99 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 HLA-DOBP13765 273 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 TNFRSF1AP19438 455 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 MDH2P40926 338 aaKnown RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 PAX2Q02962 417 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 SPANXN4Q5MJ08 99 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 VAX1Q5SQQ9 334 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 GPR157Q5UAW9 335 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 PIGWQ7Z7B1 504 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 JAZF1Q86VZ6 243 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 MIER2Q8N344 545 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 CLIP4Q8N3C7 705 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 ZNF283Q8N7M2 679 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 LSMEM1Q8N8F7 131 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 OR10S1Q8NGN2 331 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 LINC01006Q8NI28 216 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 FGFBP3Q8TAT2 258 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 C10orf82Q8WW14 230 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 DNAJA4Q8WW22 397 aaPredicted RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 GEMIN6Q8WXD5 167 aaKnown RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 DCLRE1CQ96SD1 692 aaKnown RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 SSBP3Q9BWW4 388 aaPredicted RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 SLC6A13Q9NSD5 602 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 MRPL39Q9NYK5 338 aaKnown RBP9.06□□□□□ -0.96
CTSB-212ENST00000526645 GLTPQ9NZD2 209 aa9.06□□□□□ -0.96
CTSB-212ENST00000526645 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 G3V4G9 280 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 BCHEP06276 602 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 TNFSF4P23510 183 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 S100A3P33764 101 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 TNFAIP6P98066 277 aaPredicted RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 ZMYND11Q15326 602 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 MAPK11Q15759 364 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 FAM189A2Q15884 450 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 ALG10BQ5I7T1 473 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 FAM91A1Q658Y4 838 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 NHLRC1Q6VVB1 395 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 SLC16A14Q7RTX9 510 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 ZER1Q7Z7L7 766 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 POU5F2Q8N7G0 328 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 ZNF781Q8N8C0 355 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 RBM15BQ8NDT2 890 aaKnown RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 BHLHE22Q8NFJ8 381 aaPredicted RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 OR6X1Q8NH79 312 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 VANGL1Q8TAA9 524 aaPredicted RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 TBC1D15Q8TC07 691 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 RAB40AQ8WXH6 277 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 TMEM54Q969K7 222 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 PPP1R14AQ96A00 147 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 SLC47A1Q96FL8 570 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 MARS2Q96GW9 593 aaKnown RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 TXNDC15Q96J42 360 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 PLEKHA8Q96JA3 519 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 SH3GL3Q99963 347 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 ELAC2Q9BQ52 826 aaKnown RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 THUMPD1Q9NXG2 353 aaKnown RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 KIF17Q9P2E2 1029 aa9.05□□□□□ -0.96
CTSB-212ENST00000526645 EIF3KQ9UBQ5 218 aaKnown RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 SOX21Q9Y651 276 aaPredicted RBP9.05□□□□□ -0.96
CTSB-212ENST00000526645 IGKV1D-42A0A075B6H8 117 aa9.04□□□□□ -0.96
CTSB-212ENST00000526645 A0A0G2JPF8 293 aa9.04□□□□□ -0.96
CTSB-212ENST00000526645 CEACAM18A8MTB9 384 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms