RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 IGHV3-13P01766 116 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 OPN1SWP03999 348 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 OR8G3PP0DMU2 310 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 UCP2P55851 309 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-201ENST00000526271 RBBP4Q09028 425 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 TRPM8Q7Z2W7 1104 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-201ENST00000526271 ZNF519Q8TB69 540 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 SYNPRQ8TBG9 265 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 MCHR2Q969V1 340 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-201ENST00000526271 DUX5Q96PT3 197 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 EPYCQ99645 322 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 ZNF747Q9BV97 191 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 PPIAL4AQ9Y536 164 aa12.09□□□□□ -0.47
CPSF1-201ENST00000526271 LOC100509620A0A075B734 347 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 TMEM247A6NEH6 219 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 QDPRP09417 244 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 CD247P20963 164 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 FUT4P22083 530 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF133P52736 654 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-201ENST00000526271 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
CPSF1-201ENST00000526271 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 C10orf53Q8N6V4 93 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 POU5F2Q8N7G0 328 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-201ENST00000526271 MCHR1Q99705 422 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 TMEM27Q9HBJ8 222 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 ARL8BQ9NVJ2 186 aa12.08□□□□□ -0.48
CPSF1-201ENST00000526271 A0A0G2JMP0 313 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 A0A0X1KG70 313 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 CPSF4LA6NMK7 179 aaKnown RBP12.07□□□□□ -0.48
CPSF1-201ENST00000526271 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 CHP2O43745 196 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 PRSS23O95084 383 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 MT-ATP6P00846 226 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 LCKP06239 509 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 HKR1P10072 659 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 CDAP32320 146 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 LIMS1P48059 325 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 LCN2P80188 198 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 MMEL1Q495T6 779 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 RUNDC3AQ59EK9 446 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ENTPD8Q5MY95 495 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 SPATA46Q5T0L3 261 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF613Q6PF04 617 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 RFPL4BQ6ZWI9 263 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 SIGLECL1Q8N7X8 197 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 OR4M2Q8NGB6 313 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 IPCEF1Q8WWN9 437 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF566Q969W8 418 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 RCN3Q96D15 328 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
CPSF1-201ENST00000526271 NSL1Q96IY1 281 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 POM121L2Q96KW2 1035 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 RAD21L1Q9H4I0 556 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF696Q9H7X3 374 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF69Q9UC07 566 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 KLHL21Q9UJP4 597 aa12.07□□□□□ -0.48
CPSF1-201ENST00000526271 J3QLI3 93 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 KPNA4O00629 521 aaPredicted RBP12.06□□□□□ -0.48
CPSF1-201ENST00000526271 MRASO14807 208 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 FMO6PO60774 539 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 SLC2A10O95528 541 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 NGFP01138 241 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 GZMMP51124 257 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 UGT2B15P54855 530 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 FMODQ06828 376 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 PCGF3Q3KNV8 242 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 PABPC1L2AQ5JQF8 200 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 DCAF12L2Q5VW00 463 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 C8orf82Q6P1X6 216 aaPredicted RBP12.06□□□□□ -0.48
CPSF1-201ENST00000526271 TMEM154Q6P9G4 183 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 HACD2Q6Y1H2 254 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 ARMC8Q8IUR7 673 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 CLDN22Q8N7P3 220 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 OR1J1Q8NGS3 322 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 AKR7LQ8NHP1 331 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 ADAMTS16Q8TE57 1224 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 GEMIN6Q8WXD5 167 aaKnown RBP12.06□□□□□ -0.48
CPSF1-201ENST00000526271 ASB10Q8WXI3 467 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 TAMM41Q96BW9 452 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 SUCNR1Q9BXA5 334 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 C7orf69Q9H7B7 122 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 CDH20Q9HBT6 801 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms